myRT

myRT report for GCA_001118005.1_6972_4_13

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Seq: CLSX01000009.1 Streptococcus pneumoniae genome assembly 6972_4#13, scaffold ERS022115SCcontig000009, whole genome shotgun sequence (52226 bp)
Overview 1 RT 1: 32157-41734 bp Neighborhood of RT #1 [32157, 41772] TraC-F-type PRK06149 Phage_lysozyme2 PRK08581 RVT-GII KOG4768 cas_Csn1 AbiEi_3_N AbiEii Feature: gene Location: 32157-34508 bp Feature: domain Description: TraC-F-type Location: 32646-34332 bp Feature: domain Description: TraC-F-type Location: 32646-34332 bp Feature: gene Location: 34510-37203 bp Feature: domain Description: PRK06149 Location: 35935-36196 bp Feature: domain Description: PRK061 49 Location: 35935-361 96 bp Feature: domain Description: Phage_lysozyme2 Location: 36307-36817 bp Feature: domain Description: Phage_lysozyme2 Location: 36307-3681 7 bp Feature: domain Description: PRK08581 Location: 36937-37186 bp Feature: domain Description: PRK08581 Location: 36937-371 86 bp Feature: gene Location: 37912-39834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38239-38974 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38239-38974 bp Feature: domain Description: KOG4768 Location: 39121-39226 bp Feature: domain Description: KOG4768 Location: 391 21 -39226 bp Feature: domain Description: cas_Csn1 Location: 39385-39664 bp Feature: domain Description: cas_Csn1 Location: 39385-39664 bp Feature: gene Location: 40169-40771 bp Feature: domain Description: AbiEi_3_N Location: 40187-40481 bp Feature: domain Description: AbiEi_3_N Location: 401 87-40481 bp Feature: gene Location: 40774-41772 bp Feature: domain Description: AbiEii Location: 40903-41734 bp Feature: domain Description: AbiEii Location: 40903-41 734 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraC-F-type (TIGR02746), PRK06149 (aminotransferase), Phage_lysozyme2 (pfam18013), PRK08581 (amidase domain-containing protein), RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase ), cas_Csn1 (TIGR01865), AbiEi_3_N (pfam17194), AbiEii (pfam08843)