myRT

myRT report for GCA_001118285.1_4976_3_10

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Seq: CPVJ01000009.1 Yersinia enterocolitica genome assembly 4976_3#10, scaffold ERS008625SCcontig000009, whole genome shotgun sequence (115074 bp)
Overview 1 RT 1: 13244-19947 bp Neighborhood of RT #1 [13244, 19973] TraD Shufflon_N RVT-Retrons RVT-Retrons PRK09692 Feature: gene Location: 13244-13519 bp Ori: CNB84213.1 Feature: domain Description: TraD Location: 13322-13499 bp Feature: domain Description: TraD Location: 1 3322-1 3499 bp Feature: gene Location: 13707-15023 bp Ori: CNB84249.1 Feature: domain Description: Shufflon_N Location: 13851-14787 bp Feature: domain Description: Shufflon_N Location: 1 3851 -1 4787 bp Feature: gene Location: 15689-16060 bp Ori: CNB84290.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 15827-16058 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 5827-1 6058 bp Feature: gene Location: 16224-17411 bp Ori: CNB84336.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 16227-16452 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 6227-1 6452 bp Feature: gene Location: 17564-18664 bp Feature: gene Location: 18744-19973 bp Ori: CNB84394.1 Gene: intA_2 Feature: domain Description: PRK09692 Location: 18747-19947 bp Feature: domain Description: PRK09692 Location: 1 8747-1 9947 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraD (pfam06412), Shufflon_N (pfam04917), RVT-Retrons, PRK09692 (Integrase; provisional)