myRT

myRT report for GCA_001120285.1_7092_6_12

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Seq: CMNE01000009.1 Streptococcus pneumoniae genome assembly 7092_6#12, scaffold ERS022618SCcontig000009, whole genome shotgun sequence (75626 bp)
Overview 1 RT 1: 27588-36845 bp Neighborhood of RT #1 [27588, 37027] COG5340 AbiEii RVT-GII KOG4768 cas_Csn1 Peptidase_M23 Phage_lysozyme2 COG3942 TraC-F-type Feature: gene Location: 27588-28178 bp Feature: domain Description: COG5340 Location: 27591-28023 bp Feature: domain Description: COG5340 Location: 27591 -28023 bp Feature: gene Location: 28175-29020 bp Feature: domain Description: AbiEii Location: 28274-28973 bp Feature: domain Description: AbiEii Location: 28274-28973 bp Feature: gene Location: 29370-31292 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29697-30432 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29697-30432 bp Feature: domain Description: KOG4768 Location: 30579-30684 bp Feature: domain Description: KOG4768 Location: 30579-30684 bp Feature: domain Description: cas_Csn1 Location: 30840-31122 bp Feature: domain Description: cas_Csn1 Location: 30840-31 1 22 bp Feature: gene Location: 32001-34679 bp Feature: domain Description: Peptidase_M23 Location: 33447-33651 bp Feature: domain Description: Peptidase_M23 Location: 33447-33651 bp Feature: domain Description: Phage_lysozyme2 Location: 33804-34314 bp Feature: domain Description: Phage_lysozyme2 Location: 33804-3431 4 bp Feature: domain Description: COG3942 Location: 34389-34662 bp Feature: domain Description: COG3942 Location: 34389-34662 bp Feature: gene Location: 34676-37027 bp Feature: domain Description: TraC-F-type Location: 35462-36845 bp Feature: domain Description: TraC-F-type Location: 35462-36845 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5340 (Transcriptional regulator, predicted component of viral defense system ), AbiEii (pfam08843), RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase ), cas_Csn1 (TIGR01865), Peptidase_M23 (pfam01551), Phage_lysozyme2 (pfam18013), COG3942 (Surface antigen ), TraC-F-type (TIGR02746)