myRT

myRT report for GCA_001120985.1_6664_1_4

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Seq: CKNS01000006.1 Streptococcus pneumoniae genome assembly 6664_1#4, scaffold ERS019378SCcontig000006, whole genome shotgun sequence (91178 bp)
Overview 1 RT 1: 85774-90870 bp Neighborhood of RT #1 [85774, 91040] Peptidase_M23 Phage_lysozyme2 COG3942 RVT-GII KOG4768 cas_Csn1 Feature: gene Location: 85774-88452 bp Feature: domain Description: Peptidase_M23 Location: 87220-87424 bp Feature: domain Description: Peptidase_M23 Location: 87220-87424 bp Feature: domain Description: Phage_lysozyme2 Location: 87577-88084 bp Feature: domain Description: Phage_lysozyme2 Location: 87577-88084 bp Feature: domain Description: COG3942 Location: 88204-88435 bp Feature: domain Description: COG3942 Location: 88204-88435 bp Feature: gene Location: 89161-89334 bp Feature: gene Location: 89487-91040 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 89490-90180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 89490-901 80 bp Feature: domain Description: KOG4768 Location: 90327-90432 bp Feature: domain Description: KOG4768 Location: 90327-90432 bp Feature: domain Description: cas_Csn1 Location: 90591-90870 bp Feature: domain Description: cas_Csn1 Location: 90591 -90870 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Peptidase_M23 (pfam01551), Phage_lysozyme2 (pfam18013), COG3942 (Surface antigen ), RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase ), cas_Csn1 (TIGR01865)

Seq: CKNS01000001.1 Streptococcus pneumoniae genome assembly 6664_1#4, scaffold ERS019378SCcontig000001, whole genome shotgun sequence (228815 bp)
Overview 1 RT 1: 189151-194156 bp Neighborhood of RT #1 [189151, 194164] antibiot_sagB RVT-GII GIIM rpsA DUF2969 Feature: gene Location: 189151-189921 bp Feature: domain Description: antibiot_sagB Location: 189409-189898 bp Feature: domain Description: antibiot_sagB Location: 189409-189898 bp Feature: gene Location: 189941-190105 bp Feature: gene Location: 191004-192182 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 191208-191823 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1912 08-19182 3 bp Feature: domain Description: GIIM Note: maturase Location: 191877-192090 bp Feature: domain Description: GIIM Note: maturase Location: 191877-192 090 bp Feature: gene Location: 192359-193561 bp Feature: domain Description: rpsA Location: 192362-193550 bp Feature: domain Description: rpsA Location: 192 362 -193550 bp Feature: gene Location: 193934-194164 bp Feature: domain Description: DUF2969 Location: 193937-194156 bp Feature: domain Description: DUF2 969 Location: 193937-194156 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT antibiot_sagB (TIGR03605), RVT-GII, GIIM (pfam08388), rpsA (TIGR00717), DUF2969 (pfam11184)