myRT

myRT report for GCA_001123385.1_5756_6_11

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Seq: CMVW01000018.1 Streptococcus pneumoniae genome assembly 5756_6#11, scaffold ERS096068SCcontig000018, whole genome shotgun sequence (40273 bp)
Overview 1 RT 1: 17257-26514 bp Neighborhood of RT #1 [17257, 26696] COG5340 AbiEii RVT-GII cas_Csn1 Peptidase_M23 Phage_lysozyme2 COG3942 TraC-F-type Feature: gene Location: 17257-17847 bp Feature: domain Description: COG5340 Location: 17260-17692 bp Feature: domain Description: COG5340 Location: 1 7260-1 7692 bp Feature: gene Location: 17844-18689 bp Feature: domain Description: AbiEii Location: 17943-18642 bp Feature: domain Description: AbiEii Location: 1 7943-1 8642 bp Feature: gene Location: 19039-20961 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19366-20101 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 9366-201 01 bp Feature: domain Description: cas_Csn1 Location: 20512-20791 bp Feature: domain Description: cas_Csn1 Location: 2051 2-20791 bp Feature: gene Location: 21670-24348 bp Feature: domain Description: Peptidase_M23 Location: 23116-23320 bp Feature: domain Description: Peptidase_M23 Location: 231 1 6-23320 bp Feature: domain Description: Phage_lysozyme2 Location: 23473-23983 bp Feature: domain Description: Phage_lysozyme2 Location: 23473-23983 bp Feature: domain Description: COG3942 Location: 24061-24331 bp Feature: domain Description: COG3942 Location: 24061 -24331 bp Feature: gene Location: 24345-26696 bp Feature: domain Description: TraC-F-type Location: 25131-26514 bp Feature: domain Description: TraC-F-type Location: 251 31 -2651 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5340 (Transcriptional regulator, predicted component of viral defense system ), AbiEii (pfam08843), RVT-GII, cas_Csn1 (TIGR01865), Peptidase_M23 (pfam01551), Phage_lysozyme2 (pfam18013), COG3942 (Surface antigen ), TraC-F-type (TIGR02746)

Seq: CMVW01000008.1 Streptococcus pneumoniae genome assembly 5756_6#11, scaffold ERS096068SCcontig000008, whole genome shotgun sequence (63886 bp)
Overview 1 RT 1: 21215-28574 bp Neighborhood of RT #1 [21215, 28591] EriC TrkA_C xerS RVT-GII GIIM Lip_prot_lig_C AceF lipoamide_DH Feature: gene Location: 21215-22765 bp Feature: domain Description: EriC Location: 21308-22520 bp Feature: domain Description: EriC Location: 2 1308-2 2 52 0 bp Feature: domain Description: TrkA_C Location: 22565-22760 bp Feature: domain Description: TrkA_C Location: 2 2 565-2 2 760 bp Feature: gene Location: 23349-24419 bp Feature: domain Description: xerS Location: 23352-24417 bp Feature: domain Description: xerS Location: 2 3352 -2 4417 bp Feature: gene Location: 25121-26299 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25325-25940 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 532 5-2 5940 bp Feature: domain Description: GIIM Note: maturase Location: 25994-26207 bp Feature: domain Description: GIIM Note: maturase Location: 2 5994-2 62 07 bp Feature: gene Location: 26464-26817 bp Feature: domain Description: Lip_prot_lig_C Location: 26557-26803 bp Feature: domain Description: Lip_prot_lig_C Location: 2 6557-2 6803 bp Feature: gene Location: 26888-28591 bp Feature: domain Description: AceF Location: 26891-27188 bp Feature: domain Description: AceF Location: 2 6891-2 7188 bp Feature: domain Description: lipoamide_DH Location: 27224-28574 bp Feature: domain Description: lipoamide_DH Location: 2 72 2 4-2 8574 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT EriC (cd01031), TrkA_C (pfam02080), xerS (PRK05084), RVT-GII, GIIM (pfam08388), Lip_prot_lig_C (pfam10437), AceF (COG0508), lipoamide_DH (TIGR01350)