myRT

myRT report for GCA_001124325.1_9803_7_68

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Seq: CMPS01000010.1 Streptococcus pneumoniae genome assembly 9803_7#68, scaffold ERS232497SCcontig000010, whole genome shotgun sequence (46417 bp)
Overview 1 RT 1: 4638-14077 bp Neighborhood of RT #1 [4638, 14253] AbiEii AbiEi_3_N RVT-GII KOG4768 cas_Csn1 PRK06149 Phage_lysozyme2 PRK08581 TraC-F-type Feature: gene Location: 4638-5636 bp Feature: domain Description: AbiEii Location: 4767-5598 bp Feature: domain Description: AbiEii Location: 4767-5598 bp Feature: gene Location: 5639-6241 bp Feature: domain Description: AbiEi_3_N Location: 5657-5951 bp Feature: domain Description: AbiEi_3_N Location: 5657-5951 bp Feature: gene Location: 6576-8498 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6903-7638 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6903-7638 bp Feature: domain Description: KOG4768 Location: 7785-7890 bp Feature: domain Description: KOG4768 Location: 7785-7890 bp Feature: domain Description: cas_Csn1 Location: 8049-8328 bp Feature: domain Description: cas_Csn1 Location: 8049-8328 bp Feature: gene Location: 9207-11900 bp Feature: domain Description: PRK06149 Location: 10632-10893 bp Feature: domain Description: PRK061 49 Location: 1 0632-1 0893 bp Feature: domain Description: Phage_lysozyme2 Location: 11004-11514 bp Feature: domain Description: Phage_lysozyme2 Location: 1 1 004-1 1 51 4 bp Feature: domain Description: PRK08581 Location: 11634-11883 bp Feature: domain Description: PRK08581 Location: 1 1 634-1 1 883 bp Feature: gene Location: 11902-14253 bp Feature: domain Description: TraC-F-type Location: 12391-14077 bp Feature: domain Description: TraC-F-type Location: 1 2391 -1 4077 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraC-F-type (TIGR02746), AbiEii (pfam08843), AbiEi_3_N (pfam17194), RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase ), cas_Csn1 (TIGR01865), PRK06149 (aminotransferase), Phage_lysozyme2 (pfam18013), PRK08581 (amidase domain-containing protein)

Seq: CMPS01000123.1 Streptococcus pneumoniae genome assembly 9803_7#68, scaffold ERS232497SCcontig000123, whole genome shotgun sequence (2250 bp)
Overview 1 RT 1: 928-2014 bp Neighborhood of RT #1 [928, 2205] RVT-GII GIIM Feature: gene Location: 928-2205 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1132-1747 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1132 -1747 bp Feature: domain Description: GIIM Note: maturase Location: 1801-2014 bp Feature: domain Description: GIIM Note: maturase Location: 1801-2 014 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)