myRT

myRT report for GCA_001124785.1_6972_3_15

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Seq: CLRT01000009.1 Streptococcus pneumoniae genome assembly 6972_3#15, scaffold ERS022093SCcontig000009, whole genome shotgun sequence (52228 bp)
Overview 1 RT 1: 32159-41736 bp Neighborhood of RT #1 [32159, 41774] TraC-F-type PRK06149 Phage_lysozyme2 PRK08581 RVT-GII KOG4768 cas_Csn1 AbiEi_3_N AbiEii Feature: gene Location: 32159-34510 bp Feature: domain Description: TraC-F-type Location: 32648-34334 bp Feature: domain Description: TraC-F-type Location: 32648-34334 bp Feature: gene Location: 34512-37205 bp Feature: domain Description: PRK06149 Location: 35937-36198 bp Feature: domain Description: PRK061 49 Location: 35937-361 98 bp Feature: domain Description: Phage_lysozyme2 Location: 36309-36819 bp Feature: domain Description: Phage_lysozyme2 Location: 36309-3681 9 bp Feature: domain Description: PRK08581 Location: 36939-37188 bp Feature: domain Description: PRK08581 Location: 36939-371 88 bp Feature: gene Location: 37914-39836 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38241-38976 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38241 -38976 bp Feature: domain Description: KOG4768 Location: 39123-39228 bp Feature: domain Description: KOG4768 Location: 391 23-39228 bp Feature: domain Description: cas_Csn1 Location: 39387-39666 bp Feature: domain Description: cas_Csn1 Location: 39387-39666 bp Feature: gene Location: 40171-40773 bp Feature: domain Description: AbiEi_3_N Location: 40189-40483 bp Feature: domain Description: AbiEi_3_N Location: 401 89-40483 bp Feature: gene Location: 40776-41774 bp Feature: domain Description: AbiEii Location: 40905-41736 bp Feature: domain Description: AbiEii Location: 40905-41 736 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraC-F-type (TIGR02746), PRK06149 (aminotransferase), Phage_lysozyme2 (pfam18013), PRK08581 (amidase domain-containing protein), RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase ), cas_Csn1 (TIGR01865), AbiEi_3_N (pfam17194), AbiEii (pfam08843)