myRT

myRT report for GCA_001126785.1_7444_8_59

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Seq: CPTN01000012.1 Streptococcus pneumoniae genome assembly 7444_8#59, scaffold ERS077267SCcontig000012, whole genome shotgun sequence (49535 bp)
Overview 1 RT 1: 2587-7674 bp Neighborhood of RT #1 [2587, 7679] RimL PRK12830 RVT-GII obgE Feature: gene Location: 2587-3138 bp Ori: CNA09365.1 Gene: ydaF_3 Feature: domain Description: RimL Location: 2626-3133 bp Feature: domain Description: RimL Location: 2626-31 33 bp Feature: gene Location: 3154-4413 bp Ori: CNA09393.1 Gene: murZ Feature: domain Description: PRK12830 Location: 3157-4408 bp Feature: domain Description: PRK1 2830 Location: 31 57-4408 bp Feature: gene Location: 4945-5226 bp Ori: CNA09414.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5149-5221 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 49-5221 bp Feature: gene Location: 6201-6359 bp Feature: gene Location: 6369-7679 bp Ori: CNA09464.1 Gene: obg Feature: domain Description: obgE Location: 6378-7674 bp Feature: domain Description: obgE Location: 6378-7674 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RimL (COG1670), PRK12830 (UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Reviewed), RVT-GII, obgE (PRK12299)

Seq: CPTN01000034.1 Streptococcus pneumoniae genome assembly 7444_8#59, scaffold ERS077267SCcontig000034, whole genome shotgun sequence (22166 bp)
Overview 1 RT 1: 8818-13713 bp Neighborhood of RT #1 [8818, 13713] MFS_MefA_like MFS_MefA_like RVT-GII GIIM RVT-GII Feature: gene Location: 8818-9339 bp Ori: CNA30666.1 Feature: domain Description: MFS_MefA_like Location: 8851-9319 bp Feature: domain Description: MFS_MefA_like Location: 8851-9319 bp Feature: gene Location: 9285-9995 bp Ori: CNA30686.1 Feature: domain Description: MFS_MefA_like Location: 9300-9930 bp Feature: domain Description: MFS_MefA_like Location: 9300-9930 bp Feature: gene Location: 10579-11439 bp Ori: CNA30700.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10582-11113 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10582 -11113 bp Feature: domain Description: GIIM Note: maturase Location: 11167-11380 bp Feature: domain Description: GIIM Note: maturase Location: 11167-11380 bp Feature: gene Location: 11443-11724 bp Ori: CNA30720.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11647-11719 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11647-11719 bp Feature: gene Location: 12836-13423 bp Feature: gene Location: 13510-13713 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_MefA_like (cd06173), RVT-GII, GIIM (pfam08388)