myRT

myRT report for GCA_001128385.1_5750_2_9

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Seq: CMVM01000022.1 Streptococcus pneumoniae genome assembly 5750_2#9, scaffold ERS096042SCcontig000022, whole genome shotgun sequence (32910 bp)
Overview 1 RT 1: 4670-11541 bp Neighborhood of RT #1 [4670, 11546] DUF2969 rpsA RVT-GII GIIM xerS EriC TrkA_C Feature: gene Location: 4670-4900 bp Feature: domain Description: DUF2969 Location: 4673-4892 bp Feature: domain Description: DUF2969 Location: 4673-4892 bp Feature: gene Location: 5273-6475 bp Feature: domain Description: rpsA Location: 5276-6464 bp Feature: domain Description: rpsA Location: 5276-6464 bp Feature: gene Location: 6652-7830 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6856-7471 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6856-7471 bp Feature: domain Description: GIIM Note: maturase Location: 7525-7738 bp Feature: domain Description: GIIM Note: maturase Location: 7525-7738 bp Feature: gene Location: 8342-9412 bp Feature: domain Description: xerS Location: 8345-9410 bp Feature: domain Description: xerS Location: 8345-941 0 bp Feature: gene Location: 9996-11546 bp Feature: domain Description: EriC Location: 10089-11301 bp Feature: domain Description: EriC Location: 1 0089-1 1 301 bp Feature: domain Description: TrkA_C Location: 11346-11541 bp Feature: domain Description: TrkA_C Location: 1 1 346-1 1 541 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2969 (pfam11184), rpsA (TIGR00717), RVT-GII, GIIM (pfam08388), xerS (PRK05084), EriC (cd01031), TrkA_C (pfam02080)

Seq: CMVM01000035.1 Streptococcus pneumoniae genome assembly 5750_2#9, scaffold ERS096042SCcontig000035, whole genome shotgun sequence (12741 bp)
Overview 1 RT 1: 139-5675 bp Neighborhood of RT #1 [139, 5827] RVT-GII cas_Csn1 Peptidase_M23 Phage_lysozyme2 PRK08581 TraC-F-type Feature: gene Location: 139-2061 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 466-1201 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 466-12 01 bp Feature: domain Description: cas_Csn1 Location: 1612-1891 bp Feature: domain Description: cas_Csn1 Location: 1612 -1891 bp Feature: gene Location: 2770-5457 bp Feature: domain Description: Peptidase_M23 Location: 4183-4387 bp Feature: domain Description: Peptidase_M2 3 Location: 4183-4387 bp Feature: domain Description: Phage_lysozyme2 Location: 4558-5098 bp Feature: domain Description: Phage_lysozyme2 Location: 4558-5098 bp Feature: domain Description: PRK08581 Location: 5224-5440 bp Feature: domain Description: PRK08581 Location: 52 2 4-5440 bp Feature: gene Location: 5468-5827 bp Feature: domain Description: TraC-F-type Location: 5483-5675 bp Feature: domain Description: TraC-F-type Location: 5483-5675 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, cas_Csn1 (TIGR01865), Peptidase_M23 (pfam01551), Phage_lysozyme2 (pfam18013), PRK08581 (amidase domain-containing protein), TraC-F-type (TIGR02746)