myRT

myRT report for GCA_001131025.1_6840_1_4

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Seq: CKZO01000004.1 Streptococcus pneumoniae genome assembly 6840_1#4, scaffold ERS021266SCcontig000004, whole genome shotgun sequence (128617 bp)
Overview 1 RT 1: 124341-128412 bp Neighborhood of RT #1 [124341, 128603] GlpF RVT-GII GIIM Feature: gene Location: 124341-125045 bp Feature: domain Description: GlpF Location: 124344-125040 bp Feature: domain Description: GlpF Location: 1 24344-1 25040 bp Feature: gene Location: 125820-126290 bp Feature: gene Location: 127326-128603 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 127530-128145 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 27530-1 281 45 bp Feature: domain Description: GIIM Note: maturase Location: 128199-128412 bp Feature: domain Description: GIIM Note: maturase Location: 1 281 99-1 2841 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GlpF (COG0580), RVT-GII, GIIM (pfam08388)

Seq: CKZO01000008.1 Streptococcus pneumoniae genome assembly 6840_1#4, scaffold ERS021266SCcontig000008, whole genome shotgun sequence (83936 bp)
Overview 1 RT 1: 30200-37338 bp Neighborhood of RT #1 [30200, 37343] PRK10549 BaeS PRK07315 RVT-GII GIIM MFS_MefA_like PRK04813 Feature: gene Location: 30200-31528 bp Feature: domain Description: PRK10549 Location: 30206-30383 bp Feature: domain Description: PRK10549 Location: 302 06-30383 bp Feature: domain Description: BaeS Location: 30551-31445 bp Feature: domain Description: BaeS Location: 30551-31445 bp Feature: gene Location: 31669-32550 bp Feature: domain Description: PRK07315 Location: 31672-32548 bp Feature: domain Description: PRK07315 Location: 31672 -32 548 bp Feature: gene Location: 32872-33693 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32875-33235 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 875-332 35 bp Feature: domain Description: GIIM Note: maturase Location: 33289-33502 bp Feature: domain Description: GIIM Note: maturase Location: 332 89-33502 bp Feature: gene Location: 34149-35327 bp Feature: domain Description: MFS_MefA_like Location: 34164-35307 bp Feature: domain Description: MFS_MefA_like Location: 34164-35307 bp Feature: gene Location: 35793-37343 bp Feature: domain Description: PRK04813 Location: 35811-37338 bp Feature: domain Description: PRK04813 Location: 35811-37338 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10549 (two-component system sensor histidine kinase BaeS), BaeS (COG0642), PRK07315 (fructose-bisphosphate aldolase; Provisional), RVT-GII, GIIM (pfam08388), MFS_MefA_like (cd06173), PRK04813 (D-alanine--poly(phosphoribitol) ligase subunit DltA)