myRT

myRT report for GCA_001134425.1_6630_6_4

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Seq: CPXW01000004.1 Streptococcus agalactiae genome assembly 6630_6#4, scaffold ERS039640SCcontig000004, whole genome shotgun sequence (142161 bp)
Overview 1 RT 1: 116570-123209 bp Neighborhood of RT #1 [116570, 123209] SR_TndX_transposase Recombinase Zn_ribbon_recom DUF4368 RVT_N RVT-GII GIIM Feature: gene Location: 116570-116761 bp Feature: gene Location: 116816-118702 bp Feature: domain Description: SR_TndX_transposase Location: 116861-117272 bp Feature: domain Description: SR_TndX_transposase Location: 1 1 6861 -1 1 7272 bp Feature: domain Description: Recombinase Location: 117377-117752 bp Feature: domain Description: Recombinase Location: 1 1 7377-1 1 7752 bp Feature: domain Description: Zn_ribbon_recom Location: 117791-117983 bp Feature: domain Description: Zn_ribbon_recom Location: 1 1 7791 -1 1 7983 bp Feature: domain Description: DUF4368 Location: 118259-118454 bp Feature: domain Description: DUF4368 Location: 1 1 8259-1 1 8454 bp Feature: gene Location: 119354-121024 bp Feature: RT Description: RVT_N Location: 119399-119642 bp Feature: RT Description: RVT_N Location: 1 1 9399-1 1 9642 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 119687-120335 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 9687-1 20335 bp Feature: domain Description: GIIM Note: maturase Location: 120389-120620 bp Feature: domain Description: GIIM Note: maturase Location: 1 20389-1 20620 bp Feature: gene Location: 121158-122507 bp Feature: gene Location: 122550-123209 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SR_TndX_transposase (cd03770), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), DUF4368 (pfam14287), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)