myRT

myRT report for GCA_001134505.1_5750_2_10

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Seq: CMUY01000023.1 Streptococcus pneumoniae genome assembly 5750_2#10, scaffold ERS096043SCcontig000023, whole genome shotgun sequence (32848 bp)
Overview 1 RT 1: 14492-23749 bp Neighborhood of RT #1 [14492, 23931] COG5340 AbiEii RVT-GII cas_Csn1 Peptidase_M23 Phage_lysozyme2 COG3942 TraC-F-type Feature: gene Location: 14492-15082 bp Feature: domain Description: COG5340 Location: 14495-14927 bp Feature: domain Description: COG5340 Location: 1 4495-1 4927 bp Feature: gene Location: 15079-15924 bp Feature: domain Description: AbiEii Location: 15178-15877 bp Feature: domain Description: AbiEii Location: 1 51 78-1 5877 bp Feature: gene Location: 16274-18196 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16601-17336 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 6601 -1 7336 bp Feature: domain Description: cas_Csn1 Location: 17747-18026 bp Feature: domain Description: cas_Csn1 Location: 1 7747-1 8026 bp Feature: gene Location: 18905-21583 bp Feature: domain Description: Peptidase_M23 Location: 20351-20555 bp Feature: domain Description: Peptidase_M23 Location: 20351 -20555 bp Feature: domain Description: Phage_lysozyme2 Location: 20708-21218 bp Feature: domain Description: Phage_lysozyme2 Location: 20708-21 21 8 bp Feature: domain Description: COG3942 Location: 21296-21566 bp Feature: domain Description: COG3942 Location: 21 296-21 566 bp Feature: gene Location: 21580-23931 bp Feature: domain Description: TraC-F-type Location: 22366-23749 bp Feature: domain Description: TraC-F-type Location: 22366-23749 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5340 (Transcriptional regulator, predicted component of viral defense system ), AbiEii (pfam08843), RVT-GII, cas_Csn1 (TIGR01865), Peptidase_M23 (pfam01551), Phage_lysozyme2 (pfam18013), COG3942 (Surface antigen ), TraC-F-type (TIGR02746)