myRT

myRT report for GCA_001134905.1_5737_8_3

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Seq: CMUX01000020.1 Streptococcus pneumoniae genome assembly 5737_8#3, scaffold ERS096024SCcontig000020, whole genome shotgun sequence (37344 bp)
Overview 1 RT 1: 34534-37239 bp Neighborhood of RT #1 [34534, 37331] DUF2969 rpsA RVT-GII GIIM Feature: gene Location: 34534-34764 bp Feature: domain Description: DUF2969 Location: 34537-34756 bp Feature: domain Description: DUF2969 Location: 34537-34756 bp Feature: gene Location: 35137-36339 bp Feature: domain Description: rpsA Location: 35140-36328 bp Feature: domain Description: rpsA Location: 351 40-36328 bp Feature: gene Location: 36516-37331 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36531-36972 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36531 -36972 bp Feature: domain Description: GIIM Note: maturase Location: 37026-37239 bp Feature: domain Description: GIIM Note: maturase Location: 37026-37239 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2969 (pfam11184), rpsA (TIGR00717), RVT-GII, GIIM (pfam08388)

Seq: CMUX01000027.1 Streptococcus pneumoniae genome assembly 5737_8#3, scaffold ERS096024SCcontig000027, whole genome shotgun sequence (26050 bp)
Overview 1 RT 1: 22332-25154 bp Neighborhood of RT #1 [22332, 25324] RVT-GII cas_Csn1 Feature: gene Location: 22332-22496 bp Feature: gene Location: 22498-23106 bp Feature: gene Location: 23402-25324 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23729-24464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 372 9-2 4464 bp Feature: domain Description: cas_Csn1 Location: 24875-25154 bp Feature: domain Description: cas_Csn1 Location: 2 4875-2 5154 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, cas_Csn1 (TIGR01865)