myRT

myRT report for GCA_001136205.1_6736_5_16

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Seq: CRFZ01000007.1 Streptococcus pneumoniae genome assembly 6736_5#16, scaffold ERS020750SCcontig000007, whole genome shotgun sequence (112346 bp)
Overview 1 RT 1: 46484-53943 bp 2 RT 2: 56422-61469 bp Neighborhood of RT #1 [46484, 54026] PRK04813 MFS_MefA_like RVT-GII GIIM PRK07315 PRK10549 BaeS Neighborhood of RT #2 [56422, 61469] LolD SalY RVT-GII GIIM Feature: gene Location: 46484-48034 bp Feature: domain Description: PRK04813 Location: 46502-48029 bp Feature: domain Description: PRK0481 3 Location: 46502-48029 bp Feature: gene Location: 48500-49678 bp Feature: domain Description: MFS_MefA_like Location: 48515-49658 bp Feature: domain Description: MFS_MefA_like Location: 4851 5-49658 bp Feature: gene Location: 50135-51412 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50339-50954 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50339-50954 bp Feature: domain Description: GIIM Note: maturase Location: 51008-51221 bp Feature: domain Description: GIIM Note: maturase Location: 51 008-51 221 bp Feature: gene Location: 51676-52557 bp Feature: domain Description: PRK07315 Location: 51679-52555 bp Feature: domain Description: PRK0731 5 Location: 51 679-52555 bp Feature: gene Location: 52698-54026 bp Feature: domain Description: PRK10549 Location: 52704-52881 bp Feature: domain Description: PRK1 0549 Location: 52704-52881 bp Feature: domain Description: BaeS Location: 53049-53943 bp Feature: domain Description: BaeS Location: 53049-53943 bp Feature: gene Location: 56422-57069 bp Feature: domain Description: LolD Location: 56437-57052 bp Feature: domain Description: LolD Location: 56437-57052 bp Feature: gene Location: 57082-58359 bp Feature: domain Description: SalY Location: 57247-58351 bp Feature: domain Description: SalY Location: 57247-58351 bp Feature: gene Location: 58497-59774 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58701-59316 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58701 -5931 6 bp Feature: domain Description: GIIM Note: maturase Location: 59370-59583 bp Feature: domain Description: GIIM Note: maturase Location: 59370-59583 bp Feature: gene Location: 60810-61154 bp Feature: gene Location: 61209-61469 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK04813 (D-alanine--poly(phosphoribitol) ligase subunit DltA), MFS_MefA_like (cd06173), RVT-GII, GIIM (pfam08388), PRK07315 (fructose-bisphosphate aldolase; Provisional), PRK10549 (two-component system sensor histidine kinase BaeS), BaeS (COG0642), LolD (COG1136), SalY (COG0577)