myRT

myRT report for GCA_001136265.1_4840_6_6

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Seq: CPWH01000081.1 Yersinia enterocolitica genome assembly 4840_6#6, scaffold ERS008548SCcontig000081, whole genome shotgun sequence (16341 bp)
Overview 1 RT 1: 7292-14010 bp Neighborhood of RT #1 [7292, 14012] TraD Shufflon_N RVT-Retrons RVT-Retrons PRK09692 Feature: gene Location: 7292-7567 bp Ori: CND32747.1 Feature: domain Description: TraD Location: 7370-7547 bp Feature: domain Description: TraD Location: 7370-7547 bp Feature: gene Location: 7755-9071 bp Ori: CND32779.1 Feature: domain Description: Shufflon_N Location: 7899-8835 bp Feature: domain Description: Shufflon_N Location: 7899-8835 bp Feature: gene Location: 9737-10108 bp Ori: CND32820.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9875-10106 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9875-1 01 06 bp Feature: gene Location: 10272-11459 bp Ori: CND32850.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 10275-10500 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 0275-1 0500 bp Feature: gene Location: 11612-12712 bp Feature: gene Location: 12837-14012 bp Ori: CND32904.1 Gene: intA_1 Feature: domain Description: PRK09692 Location: 12849-14010 bp Feature: domain Description: PRK09692 Location: 1 2849-1 401 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraD (pfam06412), Shufflon_N (pfam04917), RVT-Retrons, PRK09692 (Integrase; provisional)