myRT

myRT report for GCA_001136745.1_5756_6_8

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Seq: CMWC01000002.1 Streptococcus pneumoniae genome assembly 5756_6#8, scaffold ERS096065SCcontig000002, whole genome shotgun sequence (91995 bp)
Overview 1 RT 1: 21232-28591 bp Neighborhood of RT #1 [21232, 28608] EriC TrkA_C xerS RVT-GII GIIM Lip_prot_lig_C AceF lipoamide_DH Feature: gene Location: 21232-22782 bp Feature: domain Description: EriC Location: 21325-22537 bp Feature: domain Description: EriC Location: 21 325-22537 bp Feature: domain Description: TrkA_C Location: 22582-22777 bp Feature: domain Description: TrkA_C Location: 22582-22777 bp Feature: gene Location: 23366-24436 bp Feature: domain Description: xerS Location: 23369-24434 bp Feature: domain Description: xerS Location: 23369-24434 bp Feature: gene Location: 25138-26316 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25342-25957 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25342-25957 bp Feature: domain Description: GIIM Note: maturase Location: 26011-26224 bp Feature: domain Description: GIIM Note: maturase Location: 2601 1 -26224 bp Feature: gene Location: 26481-26834 bp Feature: domain Description: Lip_prot_lig_C Location: 26574-26820 bp Feature: domain Description: Lip_prot_lig_C Location: 26574-26820 bp Feature: gene Location: 26905-28608 bp Feature: domain Description: AceF Location: 26908-27205 bp Feature: domain Description: AceF Location: 26908-27205 bp Feature: domain Description: lipoamide_DH Location: 27241-28591 bp Feature: domain Description: lipoamide_DH Location: 27241 -28591 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT EriC (cd01031), TrkA_C (pfam02080), xerS (PRK05084), RVT-GII, GIIM (pfam08388), Lip_prot_lig_C (pfam10437), AceF (COG0508), lipoamide_DH (TIGR01350)

Seq: CMWC01000006.1 Streptococcus pneumoniae genome assembly 5756_6#8, scaffold ERS096065SCcontig000006, whole genome shotgun sequence (61492 bp)
Overview 1 RT 1: 27420-36677 bp Neighborhood of RT #1 [27420, 36859] COG5340 AbiEii RVT-GII cas_Csn1 Peptidase_M23 Phage_lysozyme2 COG3942 TraC-F-type Feature: gene Location: 27420-28010 bp Feature: domain Description: COG5340 Location: 27423-27855 bp Feature: domain Description: COG5340 Location: 2 742 3-2 7855 bp Feature: gene Location: 28007-28852 bp Feature: domain Description: AbiEii Location: 28106-28805 bp Feature: domain Description: AbiEii Location: 2 8106-2 8805 bp Feature: gene Location: 29202-31124 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29529-30264 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 952 9-302 64 bp Feature: domain Description: cas_Csn1 Location: 30675-30954 bp Feature: domain Description: cas_Csn1 Location: 30675-30954 bp Feature: gene Location: 31833-34511 bp Feature: domain Description: Peptidase_M23 Location: 33279-33483 bp Feature: domain Description: Peptidase_M2 3 Location: 332 79-33483 bp Feature: domain Description: Phage_lysozyme2 Location: 33636-34146 bp Feature: domain Description: Phage_lysozyme2 Location: 33636-34146 bp Feature: domain Description: COG3942 Location: 34224-34494 bp Feature: domain Description: COG3942 Location: 342 2 4-34494 bp Feature: gene Location: 34508-36859 bp Feature: domain Description: TraC-F-type Location: 35294-36677 bp Feature: domain Description: TraC-F-type Location: 352 94-36677 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5340 (Transcriptional regulator, predicted component of viral defense system ), AbiEii (pfam08843), RVT-GII, cas_Csn1 (TIGR01865), Peptidase_M23 (pfam01551), Phage_lysozyme2 (pfam18013), COG3942 (Surface antigen ), TraC-F-type (TIGR02746)