myRT

myRT report for GCA_001145705.1_6731_6_9

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Seq: CIMU01000006.1 Streptococcus pneumoniae genome assembly 6731_6#9, scaffold ERS020623SCcontig000006, whole genome shotgun sequence (75389 bp)
Overview 1 RT 1: 21437-31606 bp Neighborhood of RT #1 [21437, 31606] KOG1000 RVT-GII Intron_maturas2 HNHc N6_Mtase COG4646 Feature: gene Location: 21437-21736 bp Feature: gene Location: 21807-23150 bp Feature: domain Description: KOG1000 Location: 22086-22401 bp Feature: domain Description: KOG1 000 Location: 22086-22401 bp Feature: gene Location: 23288-25066 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23549-24341 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23549-24341 bp Feature: domain Description: Intron_maturas2 Location: 24446-24677 bp Feature: domain Description: Intron_maturas2 Location: 24446-24677 bp Feature: domain Description: HNHc Note: nucleases Location: 24842-25028 bp Feature: domain Description: HNHc Note: nucleases Location: 24842-25028 bp Feature: gene Location: 25564-31005 bp Feature: domain Description: N6_Mtase Location: 27556-28147 bp Feature: domain Description: N6_Mtase Location: 27556-281 47 bp Feature: domain Description: COG4646 Location: 28738-30862 bp Feature: domain Description: COG4646 Location: 28738-30862 bp Feature: gene Location: 31055-31606 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class )