myRT

myRT report for GCA_001152565.1_4821_6_12

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Seq: CQAZ01000033.1 Yersinia pekkanenii genome assembly 4821_6#12, scaffold ERS008529SCcontig000033, whole genome shotgun sequence (55598 bp)
Overview 1 RT 1: 45114-52458 bp Neighborhood of RT #1 [45114, 52466] PRK10296 PRK02134 RVT-Retrons Prim_Zn_Ribbon TOPRIM_primases COG3378 Feature: gene Location: 45114-45944 bp Ori: CNI20779.1 Gene: celD Feature: domain Description: PRK10296 Location: 45117-45921 bp Feature: domain Description: PRK1 0296 Location: 451 1 7-45921 bp Feature: gene Location: 45993-46754 bp Ori: CNI20804.1 Feature: domain Description: PRK02134 Location: 45996-46752 bp Feature: domain Description: PRK021 34 Location: 45996-46752 bp Feature: gene Location: 47701-48627 bp Ori: CNI20821.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 47800-48382 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 47800-48382 bp Feature: gene Location: 48617-49558 bp Feature: gene Location: 50133-52466 bp Ori: CNI20879.1 Gene: traC_2 Feature: domain Description: Prim_Zn_Ribbon Location: 50229-50337 bp Feature: domain Description: Prim_Zn_Ribbon Location: 50229-50337 bp Feature: domain Description: TOPRIM_primases Location: 50772-51000 bp Feature: domain Description: TOPRIM_primases Location: 50772-51 000 bp Feature: domain Description: COG3378 Location: 51000-52458 bp Feature: domain Description: COG3378 Location: 51 000-52458 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10296 (DNA-binding transcriptional regulator ChbR; Provisional), PRK02134 (chitin disaccharide deacetylase), RVT-Retrons, Prim_Zn_Ribbon (smart00778), TOPRIM_primases (cd01029), COG3378 (Phage- or plasmid-associated DNA primase )