myRT

myRT report for GCA_001160225.1_7414_6_1

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Seq: CPWZ01000154.1 Mycobacterium tuberculosis genome assembly 7414_6#1, scaffold ERS075342SCcontig000154, whole genome shotgun sequence (14858 bp)
Overview 1 RT 1: 732-3811 bp Neighborhood of RT #1 [732, 3811] PTPS NrdG RVT-CRISPR-like YfmG Feature: gene Location: 732-1133 bp Ori: CNG50417.1 Gene: queD Feature: domain Description: PTPS Location: 741-1095 bp Feature: domain Description: PTPS Location: 741 -1 095 bp Feature: gene Location: 1130-1837 bp Ori: CNG50452.1 Gene: queE Feature: domain Description: NrdG Location: 1160-1820 bp Feature: domain Description: NrdG Location: 1 1 60-1 820 bp Feature: gene Location: 2076-2774 bp Ori: CNG50486.1 Gene: ltrA_1 Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 2214-2733 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 221 4-2733 bp Feature: gene Location: 2799-3347 bp Ori: CNG50520.1 Gene: egtB_2 Feature: domain Description: YfmG Location: 2931-3342 bp Feature: domain Description: YfmG Location: 2931 -3342 bp Feature: gene Location: 3377-3811 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PTPS (pfam01242), NrdG (TIGR02491), RVT-CRISPR, YfmG (COG1262)

Seq: CPWZ01000255.1 Mycobacterium tuberculosis genome assembly 7414_6#1, scaffold ERS075342SCcontig000255, whole genome shotgun sequence (2427 bp)
Overview 1 RT 1: 111-2038 bp Neighborhood of RT #1 [111, 2038] RVT-GII Intron_maturas2 Feature: gene Location: 111-1895 bp Ori: CNG86139.1 Gene: ltrA_2 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 372-1167 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 372 -1167 bp Feature: domain Description: Intron_maturas2 Location: 1281-1503 bp Feature: domain Description: Intron_maturas2 Location: 12 81-1503 bp Feature: gene Location: 1919-2038 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348)

Seq: CPWZ01000262.1 Mycobacterium tuberculosis genome assembly 7414_6#1, scaffold ERS075342SCcontig000262, whole genome shotgun sequence (2142 bp)
Overview 1 RT 1: 167-1406 bp Neighborhood of RT #1 [167, 1546] RVT-GII GIIM Feature: gene Location: 167-1546 bp Ori: CNG87146.1 Gene: ltrA_4 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 485-1115 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 485-1115 bp Feature: domain Description: GIIM Note: maturase Location: 1202-1406 bp Feature: domain Description: GIIM Note: maturase Location: 1202-1406 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: CPWZ01000260.1 Mycobacterium tuberculosis genome assembly 7414_6#1, scaffold ERS075342SCcontig000260, whole genome shotgun sequence (2206 bp)
Overview 1 RT 1: 119-1421 bp Neighborhood of RT #1 [119, 1567] RVT-GII GIIM Feature: gene Location: 119-1567 bp Ori: CNG86981.1 Gene: ltrA_3 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 440-1127 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 4 0-1127 bp Feature: domain Description: GIIM Note: maturase Location: 1199-1421 bp Feature: domain Description: GIIM Note: maturase Location: 1199-14 21 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)