myRT

myRT report for GCA_001162085.1_10209_5_41

Download annotations/find similar RTs

Seq: CIVH01000003.1 Salmonella enterica subsp. enterica serovar Typhi genome assembly 10209_5#41, scaffold ERS239662SCcontig000003, whole genome shotgun sequence (295995 bp)
Overview 1 RT 1: 38165-43437 bp Neighborhood of RT #1 [38165, 43454] type_I_sec_LssB type_I_hlyD type_I_hlyD RVT-UG11 PRK09678 Feature: gene Location: 38165-40321 bp Ori: CGT50439.1 Gene: apxIB_1 Feature: domain Description: type_I_sec_LssB Location: 38225-40298 bp Feature: domain Description: type_I_sec_LssB Location: 38225-40298 bp Feature: gene Location: 40326-41516 bp Ori: CGT50481.1 Gene: prsE_1 Feature: domain Description: type_I_hlyD Location: 40407-40851 bp Feature: domain Description: type_I_hlyD Location: 40407-40851 bp Feature: domain Description: type_I_hlyD Location: 40890-41514 bp Feature: domain Description: type_I_hlyD Location: 40890-41 51 4 bp Feature: gene Location: 42059-42832 bp Ori: CGT50550.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 42194-42647 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 421 94-42647 bp Feature: gene Location: 42801-42974 bp Feature: gene Location: 43236-43454 bp Ori: CGT50615.1 Gene: ogr Feature: domain Description: PRK09678 Location: 43239-43437 bp Feature: domain Description: PRK09678 Location: 43239-43437 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT type_I_sec_LssB (TIGR03375), type_I_hlyD (TIGR01843), RVT-UG11, PRK09678 (DNA-binding transcriptional regulator; Provisional)