myRT

myRT report for GCA_001164405.1_6983_7_54

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Seq: CLYN01000075.1 Streptococcus pneumoniae genome assembly 6983_7#54, scaffold ERS021867SCcontig000075, whole genome shotgun sequence (2142 bp)
Overview 1 RT 1: 1-1087 bp Neighborhood of RT #1 [1, 1278] RVT-GII GIIM Feature: gene Location: 1-1278 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 205-820 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 205-820 bp Feature: domain Description: GIIM Note: maturase Location: 874-1087 bp Feature: domain Description: GIIM Note: maturase Location: 874-1 087 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: CLYN01000011.1 Streptococcus pneumoniae genome assembly 6983_7#54, scaffold ERS021867SCcontig000011, whole genome shotgun sequence (52226 bp)
Overview 1 RT 1: 10455-19894 bp Neighborhood of RT #1 [10455, 20070] AbiEii AbiEi_3_N RVT-GII KOG4768 cas_Csn1 PRK06149 Phage_lysozyme2 PRK08581 TraC-F-type Feature: gene Location: 10455-11453 bp Feature: domain Description: AbiEii Location: 10584-11415 bp Feature: domain Description: AbiEii Location: 10584-11415 bp Feature: gene Location: 11456-12058 bp Feature: domain Description: AbiEi_3_N Location: 11474-11768 bp Feature: domain Description: AbiEi_3_N Location: 11474-11768 bp Feature: gene Location: 12393-14315 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12720-13455 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 72 0-13455 bp Feature: domain Description: KOG4768 Location: 13602-13707 bp Feature: domain Description: KOG4768 Location: 13602 -13707 bp Feature: domain Description: cas_Csn1 Location: 13866-14145 bp Feature: domain Description: cas_Csn1 Location: 13866-14145 bp Feature: gene Location: 15024-17717 bp Feature: domain Description: PRK06149 Location: 16449-16710 bp Feature: domain Description: PRK06149 Location: 16449-16710 bp Feature: domain Description: Phage_lysozyme2 Location: 16821-17331 bp Feature: domain Description: Phage_lysozyme2 Location: 1682 1-17331 bp Feature: domain Description: PRK08581 Location: 17451-17700 bp Feature: domain Description: PRK08581 Location: 17451-17700 bp Feature: gene Location: 17719-20070 bp Feature: domain Description: TraC-F-type Location: 18208-19894 bp Feature: domain Description: TraC-F-type Location: 182 08-19894 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase ), cas_Csn1 (TIGR01865), PRK06149 (aminotransferase), Phage_lysozyme2 (pfam18013), PRK08581 (amidase domain-containing protein), TraC-F-type (TIGR02746)