myRT

myRT report for GCA_001165965.2_7622_4_4

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Seq: COEC02000071.1 Streptococcus pneumoniae genome assembly 7622_4#4, scaffold GL3078_contig_164, whole genome shotgun sequence (2307 bp)
Overview 1 RT 1: 126-1212 bp Neighborhood of RT #1 [126, 1403] RVT-GII GIIM Feature: gene Location: 126-1403 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 330-945 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 330-945 bp Feature: domain Description: GIIM Note: maturase Location: 999-1212 bp Feature: domain Description: GIIM Note: maturase Location: 999-1 21 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: COEC02000028.1 Streptococcus pneumoniae genome assembly 7622_4#4, scaffold GL3078_contig_125, whole genome shotgun sequence (69055 bp)
Overview 1 RT 1: 31836-41407 bp Neighborhood of RT #1 [31836, 41445] TraC-F-type PRK06149 Phage_lysozyme2 PRK08581 RVT-GII KOG4768 cas_Csn1 AbiEi_3_N AbiEii Feature: gene Location: 31836-34187 bp Feature: domain Description: TraC-F-type Location: 32325-34011 bp Feature: domain Description: TraC-F-type Location: 32 32 5-34011 bp Feature: gene Location: 34189-36882 bp Feature: domain Description: PRK06149 Location: 35614-35875 bp Feature: domain Description: PRK06149 Location: 35614-35875 bp Feature: domain Description: Phage_lysozyme2 Location: 35986-36496 bp Feature: domain Description: Phage_lysozyme2 Location: 35986-36496 bp Feature: domain Description: PRK08581 Location: 36616-36865 bp Feature: domain Description: PRK08581 Location: 36616-36865 bp Feature: gene Location: 37591-39513 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37918-38653 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37918-38653 bp Feature: domain Description: KOG4768 Location: 38800-38905 bp Feature: domain Description: KOG4768 Location: 38800-38905 bp Feature: domain Description: cas_Csn1 Location: 39064-39343 bp Feature: domain Description: cas_Csn1 Location: 39064-39343 bp Feature: gene Location: 39821-40444 bp Feature: domain Description: AbiEi_3_N Location: 39860-40154 bp Feature: domain Description: AbiEi_3_N Location: 39860-40154 bp Feature: gene Location: 40447-41445 bp Feature: domain Description: AbiEii Location: 40576-41407 bp Feature: domain Description: AbiEii Location: 40576-41407 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraC-F-type (TIGR02746), PRK06149 (aminotransferase), Phage_lysozyme2 (pfam18013), PRK08581 (amidase domain-containing protein), RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase ), cas_Csn1 (TIGR01865), AbiEi_3_N (pfam17194), AbiEii (pfam08843)