myRT

myRT report for GCA_001166325.1_6753_3_7

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Seq: CRKM01000001.1 Streptococcus pneumoniae genome assembly 6753_3#7, scaffold ERS021029SCcontig000001, whole genome shotgun sequence (199665 bp)
Overview 1 RT 1: 9155-15091 bp Neighborhood of RT #1 [9155, 15114] AceF lipoamide_DH lipoyltrans RVT-GII GIIM antibiot_sagB Feature: gene Location: 9155-10858 bp Feature: domain Description: AceF Location: 9158-9455 bp Feature: domain Description: AceF Location: 91 58-9455 bp Feature: domain Description: lipoamide_DH Location: 9491-10841 bp Feature: domain Description: lipoamide_DH Location: 9491 -1 0841 bp Feature: gene Location: 10929-11918 bp Feature: domain Description: lipoyltrans Location: 10941-11889 bp Feature: domain Description: lipoyltrans Location: 1 0941 -1 1 889 bp Feature: gene Location: 12083-13261 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12287-12902 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 2287-1 2902 bp Feature: domain Description: GIIM Note: maturase Location: 12956-13169 bp Feature: domain Description: GIIM Note: maturase Location: 1 2956-1 31 69 bp Feature: gene Location: 14160-14324 bp Feature: gene Location: 14344-15114 bp Feature: domain Description: antibiot_sagB Location: 14602-15091 bp Feature: domain Description: antibiot_sagB Location: 1 4602-1 5091 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT lipoyltrans (TIGR00545), RVT-GII, GIIM (pfam08388), antibiot_sagB (TIGR03605), AceF (COG0508), lipoamide_DH (TIGR01350)

Seq: CRKM01000027.1 Streptococcus pneumoniae genome assembly 6753_3#7, scaffold ERS021029SCcontig000027, whole genome shotgun sequence (29465 bp)
Overview 1 RT 1: 8682-15645 bp Neighborhood of RT #1 [8682, 15800] Phage_lysozyme2 PRK08581 RVT-GII cas_Csn1 AbiEii COG5340 Feature: gene Location: 8682-9539 bp Feature: gene Location: 9651-11387 bp Feature: domain Description: Phage_lysozyme2 Location: 10491-11004 bp Feature: domain Description: Phage_lysozyme2 Location: 10491-11004 bp Feature: domain Description: PRK08581 Location: 11121-11370 bp Feature: domain Description: PRK08581 Location: 1112 1-11370 bp Feature: gene Location: 12096-14018 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12423-13158 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 42 3-13158 bp Feature: domain Description: cas_Csn1 Location: 13569-13848 bp Feature: domain Description: cas_Csn1 Location: 13569-13848 bp Feature: gene Location: 14368-15213 bp Feature: domain Description: AbiEii Location: 14467-15166 bp Feature: domain Description: AbiEii Location: 14467-15166 bp Feature: gene Location: 15210-15800 bp Feature: domain Description: COG5340 Location: 15213-15645 bp Feature: domain Description: COG5340 Location: 152 13-15645 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, cas_Csn1 (TIGR01865), AbiEii (pfam08843), COG5340 (Transcriptional regulator, predicted component of viral defense system ), Phage_lysozyme2 (pfam18013), PRK08581 (amidase domain-containing protein)