myRT

myRT report for GCA_001167505.1_6649_8_14

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Seq: CKMU01000023.1 Streptococcus pneumoniae genome assembly 6649_8#14, scaffold ERS019340SCcontig000023, whole genome shotgun sequence (30908 bp)
Overview 1 RT 1: 8678-15641 bp Neighborhood of RT #1 [8678, 15796] Phage_lysozyme2 PRK08581 RVT-GII cas_Csn1 AbiEii COG5340 Feature: gene Location: 8678-9535 bp Feature: gene Location: 9647-11383 bp Feature: domain Description: Phage_lysozyme2 Location: 10487-11000 bp Feature: domain Description: Phage_lysozyme2 Location: 1 0487-1 1 000 bp Feature: domain Description: PRK08581 Location: 11117-11366 bp Feature: domain Description: PRK08581 Location: 1 1 1 1 7-1 1 366 bp Feature: gene Location: 12092-14014 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12419-13154 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 241 9-1 31 54 bp Feature: domain Description: cas_Csn1 Location: 13565-13844 bp Feature: domain Description: cas_Csn1 Location: 1 3565-1 3844 bp Feature: gene Location: 14364-15209 bp Feature: domain Description: AbiEii Location: 14463-15162 bp Feature: domain Description: AbiEii Location: 1 4463-1 51 62 bp Feature: gene Location: 15206-15796 bp Feature: domain Description: COG5340 Location: 15209-15641 bp Feature: domain Description: COG5340 Location: 1 5209-1 5641 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, cas_Csn1 (TIGR01865), AbiEii (pfam08843), COG5340 (Transcriptional regulator, predicted component of viral defense system ), Phage_lysozyme2 (pfam18013), PRK08581 (amidase domain-containing protein)