myRT

myRT report for GCA_001168705.1_6899_6_6

Download annotations/find similar RTs

Seq: CLET01000006.1 Streptococcus pneumoniae genome assembly 6899_6#6, scaffold ERS021580SCcontig000006, whole genome shotgun sequence (78744 bp)
Overview 1 RT 1: 24780-34949 bp Neighborhood of RT #1 [24780, 34949] KOG1000 RVT-GII Intron_maturas2 HNHc N6_Mtase COG4646 Feature: gene Location: 24780-25079 bp Feature: gene Location: 25150-26493 bp Feature: domain Description: KOG1000 Location: 25429-25744 bp Feature: domain Description: KOG1 000 Location: 25429-25744 bp Feature: gene Location: 26631-28409 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26892-27684 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26892-27684 bp Feature: domain Description: Intron_maturas2 Location: 27789-28020 bp Feature: domain Description: Intron_maturas2 Location: 27789-28020 bp Feature: domain Description: HNHc Note: nucleases Location: 28185-28371 bp Feature: domain Description: HNHc Note: nucleases Location: 281 85-28371 bp Feature: gene Location: 28907-34348 bp Feature: domain Description: N6_Mtase Location: 30899-31490 bp Feature: domain Description: N6_Mtase Location: 30899-31 490 bp Feature: domain Description: COG4646 Location: 32081-34205 bp Feature: domain Description: COG4646 Location: 32081 -34205 bp Feature: gene Location: 34398-34949 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class )