myRT

myRT report for GCA_001169605.1_5737_2_11

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Seq: CMTG01000010.1 Streptococcus pneumoniae genome assembly 5737_2#11, scaffold ERS096104SCcontig000010, whole genome shotgun sequence (59550 bp)
Overview 1 RT 1: 36604-45888 bp Neighborhood of RT #1 [36604, 46043] TraC-F-type Peptidase_M23 Phage_lysozyme2 COG3942 RVT-GII KOG4768 cas_Csn1 AbiEii COG5340 Feature: gene Location: 36604-38955 bp Feature: domain Description: TraC-F-type Location: 37390-38773 bp Feature: domain Description: TraC-F-type Location: 37390-38773 bp Feature: gene Location: 38952-41630 bp Feature: domain Description: Peptidase_M23 Location: 40398-40602 bp Feature: domain Description: Peptidase_M23 Location: 40398-40602 bp Feature: domain Description: Phage_lysozyme2 Location: 40755-41265 bp Feature: domain Description: Phage_lysozyme2 Location: 40755-41 265 bp Feature: domain Description: COG3942 Location: 41340-41613 bp Feature: domain Description: COG3942 Location: 41 340-41 61 3 bp Feature: gene Location: 42339-44261 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42666-43401 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42666-43401 bp Feature: domain Description: KOG4768 Location: 43548-43653 bp Feature: domain Description: KOG4768 Location: 43548-43653 bp Feature: domain Description: cas_Csn1 Location: 43812-44091 bp Feature: domain Description: cas_Csn1 Location: 4381 2-44091 bp Feature: gene Location: 44611-45456 bp Feature: domain Description: AbiEii Location: 44710-45409 bp Feature: domain Description: AbiEii Location: 4471 0-45409 bp Feature: gene Location: 45453-46043 bp Feature: domain Description: COG5340 Location: 45456-45888 bp Feature: domain Description: COG5340 Location: 45456-45888 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraC-F-type (TIGR02746), Peptidase_M23 (pfam01551), Phage_lysozyme2 (pfam18013), COG3942 (Surface antigen ), RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase ), cas_Csn1 (TIGR01865), AbiEii (pfam08843), COG5340 (Transcriptional regulator, predicted component of viral defense system )

Seq: CMTG01000003.1 Streptococcus pneumoniae genome assembly 5737_2#11, scaffold ERS096104SCcontig000003, whole genome shotgun sequence (117605 bp)
Overview 1 RT 1: 102369-109049 bp Neighborhood of RT #1 [102369, 109049] PRK04813 MFS_MefA_like RVT-GII GIIM RVT-GII Feature: gene Location: 102369-103919 bp Feature: domain Description: PRK04813 Location: 102387-103914 bp Feature: domain Description: PRK04813 Location: 102 387-103914 bp Feature: gene Location: 104385-105563 bp Feature: domain Description: MFS_MefA_like Location: 104400-105543 bp Feature: domain Description: MFS_MefA_like Location: 104400-105543 bp Feature: gene Location: 106018-106578 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 106027-106120 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10602 7-10612 0 bp Feature: domain Description: GIIM Note: maturase Location: 106174-106387 bp Feature: domain Description: GIIM Note: maturase Location: 106174-106387 bp Feature: gene Location: 106578-107294 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 106782-107274 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 106782 -1072 74 bp Feature: gene Location: 108112-108309 bp Feature: gene Location: 108390-109049 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK04813 (D-alanine--poly(phosphoribitol) ligase subunit DltA), MFS_MefA_like (cd06173), RVT-GII, GIIM (pfam08388)