myRT

myRT report for GCA_001170425.1_6983_8_91

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Seq: CLZR01000011.1 Streptococcus pneumoniae genome assembly 6983_8#91, scaffold ERS021904SCcontig000011, whole genome shotgun sequence (55561 bp)
Overview 1 RT 1: 13853-23110 bp Neighborhood of RT #1 [13853, 23292] COG5340 AbiEii RVT-GII cas_Csn1 Peptidase_M23 Phage_lysozyme2 COG3942 TraC-F-type Feature: gene Location: 13853-14443 bp Feature: domain Description: COG5340 Location: 13856-14288 bp Feature: domain Description: COG5340 Location: 1 3856-1 4288 bp Feature: gene Location: 14440-15285 bp Feature: domain Description: AbiEii Location: 14539-15238 bp Feature: domain Description: AbiEii Location: 1 4539-1 5238 bp Feature: gene Location: 15635-17557 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15962-16697 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 5962-1 6697 bp Feature: domain Description: cas_Csn1 Location: 17108-17387 bp Feature: domain Description: cas_Csn1 Location: 1 71 08-1 7387 bp Feature: gene Location: 18266-20944 bp Feature: domain Description: Peptidase_M23 Location: 19712-19916 bp Feature: domain Description: Peptidase_M23 Location: 1 971 2-1 991 6 bp Feature: domain Description: Phage_lysozyme2 Location: 20069-20576 bp Feature: domain Description: Phage_lysozyme2 Location: 20069-20576 bp Feature: domain Description: COG3942 Location: 20696-20927 bp Feature: domain Description: COG3942 Location: 20696-20927 bp Feature: gene Location: 20941-23292 bp Feature: domain Description: TraC-F-type Location: 21727-23110 bp Feature: domain Description: TraC-F-type Location: 21 727-231 1 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5340 (Transcriptional regulator, predicted component of viral defense system ), AbiEii (pfam08843), RVT-GII, cas_Csn1 (TIGR01865), Peptidase_M23 (pfam01551), Phage_lysozyme2 (pfam18013), COG3942 (Surface antigen ), TraC-F-type (TIGR02746)

Seq: CLZR01000047.1 Streptococcus pneumoniae genome assembly 6983_8#91, scaffold ERS021904SCcontig000047, whole genome shotgun sequence (11499 bp)
Overview 1 RT 1: 101-4147 bp Neighborhood of RT #1 [101, 4152] RVT-GII GIIM GlpF Feature: gene Location: 101-1108 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 305-920 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 305-92 0 bp Feature: domain Description: GIIM Note: maturase Location: 974-1103 bp Feature: domain Description: GIIM Note: maturase Location: 974-1103 bp Feature: gene Location: 2202-2861 bp Feature: gene Location: 3448-4152 bp Feature: domain Description: GlpF Location: 3451-4147 bp Feature: domain Description: GlpF Location: 3451-4147 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), GlpF (COG0580)