myRT

myRT report for GCA_001170845.1_6983_4_84

Download annotations/find similar RTs

Seq: CLWB01000015.1 Streptococcus pneumoniae genome assembly 6983_4#84, scaffold ERS021801SCcontig000015, whole genome shotgun sequence (55556 bp)
Overview 1 RT 1: 13854-23111 bp Neighborhood of RT #1 [13854, 23293] COG5340 AbiEii RVT-GII cas_Csn1 Peptidase_M23 Phage_lysozyme2 COG3942 TraC-F-type Feature: gene Location: 13854-14444 bp Feature: domain Description: COG5340 Location: 13857-14289 bp Feature: domain Description: COG5340 Location: 1 3857-1 4289 bp Feature: gene Location: 14441-15286 bp Feature: domain Description: AbiEii Location: 14540-15239 bp Feature: domain Description: AbiEii Location: 1 4540-1 5239 bp Feature: gene Location: 15636-17558 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15963-16698 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 5963-1 6698 bp Feature: domain Description: cas_Csn1 Location: 17109-17388 bp Feature: domain Description: cas_Csn1 Location: 1 71 09-1 7388 bp Feature: gene Location: 18267-20945 bp Feature: domain Description: Peptidase_M23 Location: 19713-19917 bp Feature: domain Description: Peptidase_M23 Location: 1 971 3-1 991 7 bp Feature: domain Description: Phage_lysozyme2 Location: 20070-20577 bp Feature: domain Description: Phage_lysozyme2 Location: 20070-20577 bp Feature: domain Description: COG3942 Location: 20697-20928 bp Feature: domain Description: COG3942 Location: 20697-20928 bp Feature: gene Location: 20942-23293 bp Feature: domain Description: TraC-F-type Location: 21728-23111 bp Feature: domain Description: TraC-F-type Location: 21 728-231 1 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5340 (Transcriptional regulator, predicted component of viral defense system ), AbiEii (pfam08843), RVT-GII, cas_Csn1 (TIGR01865), Peptidase_M23 (pfam01551), Phage_lysozyme2 (pfam18013), COG3942 (Surface antigen ), TraC-F-type (TIGR02746)

Seq: CLWB01000013.1 Streptococcus pneumoniae genome assembly 6983_4#84, scaffold ERS021801SCcontig000013, whole genome shotgun sequence (58606 bp)
Overview 1 RT 1: 44733-49392 bp Neighborhood of RT #1 [44733, 49392] MFS_MefA_like GIIM RVT-GII GIIM Feature: gene Location: 44733-45911 bp Feature: domain Description: MFS_MefA_like Location: 44748-45891 bp Feature: domain Description: MFS_MefA_like Location: 44748-45891 bp Feature: gene Location: 46363-46671 bp Feature: domain Description: GIIM Note: maturase Location: 46390-46480 bp Feature: domain Description: GIIM Note: maturase Location: 46390-46480 bp Feature: gene Location: 46632-47639 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46836-47451 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46836-47451 bp Feature: domain Description: GIIM Note: maturase Location: 47505-47634 bp Feature: domain Description: GIIM Note: maturase Location: 47505-47634 bp Feature: gene Location: 48455-48652 bp Feature: gene Location: 48733-49392 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_MefA_like (cd06173), GIIM (pfam08388), RVT-GII