myRT

myRT report for GCA_001171045.1_5919_1_10

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Seq: CMWL01000026.1 Streptococcus pneumoniae genome assembly 5919_1#10, scaffold ERS095995SCcontig000026, whole genome shotgun sequence (31948 bp)
Overview 1 RT 1: 13577-22834 bp Neighborhood of RT #1 [13577, 23016] COG5340 AbiEii RVT-GII KOG4768 Peptidase_M23 Phage_lysozyme2 COG3942 TraC-F-type Feature: gene Location: 13577-14167 bp Feature: domain Description: COG5340 Location: 13583-14012 bp Feature: domain Description: COG5340 Location: 1 3583-1 401 2 bp Feature: gene Location: 14164-15009 bp Feature: domain Description: AbiEii Location: 14263-14962 bp Feature: domain Description: AbiEii Location: 1 4263-1 4962 bp Feature: gene Location: 15359-17281 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15686-16421 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 5686-1 6421 bp Feature: domain Description: KOG4768 Location: 16568-16673 bp Feature: domain Description: KOG4768 Location: 1 6568-1 6673 bp Feature: gene Location: 17990-20668 bp Feature: domain Description: Peptidase_M23 Location: 19436-19640 bp Feature: domain Description: Peptidase_M23 Location: 1 9436-1 9640 bp Feature: domain Description: Phage_lysozyme2 Location: 19793-20303 bp Feature: domain Description: Phage_lysozyme2 Location: 1 9793-20303 bp Feature: domain Description: COG3942 Location: 20378-20651 bp Feature: domain Description: COG3942 Location: 20378-20651 bp Feature: gene Location: 20665-23016 bp Feature: domain Description: TraC-F-type Location: 21451-22834 bp Feature: domain Description: TraC-F-type Location: 21 451 -22834 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5340 (Transcriptional regulator, predicted component of viral defense system ), AbiEii (pfam08843), RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase ), Peptidase_M23 (pfam01551), Phage_lysozyme2 (pfam18013), COG3942 (Surface antigen ), TraC-F-type (TIGR02746)