myRT

myRT report for GCA_001174945.1_5749_7_5

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Seq: CWGM01000055.1 Yersinia enterocolitica genome assembly 5749_7#5, scaffold ERS008734SCcontig000055, whole genome shotgun sequence (16522 bp)
Overview 1 RT 1: 50-5799 bp Neighborhood of RT #1 [50, 5819] PRK09692 RVT-Retrons RVT-Retrons Shufflon_N TraD Feature: gene Location: 50-319 bp Ori: CRX54751.1 Gene: intA_2 Feature: domain Description: PRK09692 Location: 53-293 bp Feature: domain Description: PRK09692 Location: 53-293 bp Feature: gene Location: 399-1499 bp Feature: gene Location: 1652-2839 bp Ori: CRX54754.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1655-1880 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 655-1 880 bp Feature: gene Location: 3003-3374 bp Ori: CRX54756.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3141-3372 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 31 41 -3372 bp Feature: gene Location: 4040-5356 bp Ori: CRX54758.1 Feature: domain Description: Shufflon_N Location: 4184-5120 bp Feature: domain Description: Shufflon_N Location: 41 84-51 20 bp Feature: gene Location: 5544-5819 bp Ori: CRX54760.1 Feature: domain Description: TraD Location: 5622-5799 bp Feature: domain Description: TraD Location: 5622-5799 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), RVT-Retrons, Shufflon_N (pfam04917), TraD (pfam06412)