myRT

myRT report for GCA_001182065.1_Streptococcus_pyogenes

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Seq: CVUH01000007.1 Streptococcus pyogenes MGAS10270 genome assembly Streptococcus pyogenes, contig contig00007, whole genome shotgun sequence (118813 bp)
Overview 1 RT 1: 19801-26438 bp Neighborhood of RT #1 [19801, 26438] SSB_OBF RVT_N RVT-GII GIIM SR_TndX_transposase Recombinase Zn_ribbon_recom DUF4368 Feature: gene Location: 19801-20460 bp Feature: domain Description: SSB_OBF Location: 20056-20326 bp Feature: domain Description: SSB_OBF Location: 20056-20326 bp Feature: gene Location: 20503-21852 bp Feature: gene Location: 21986-23656 bp Feature: RT Description: RVT_N Location: 22031-22274 bp Feature: RT Description: RVT_N Location: 22031 -22274 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22319-22967 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2231 9-22967 bp Feature: domain Description: GIIM Note: maturase Location: 23021-23252 bp Feature: domain Description: GIIM Note: maturase Location: 23021 -23252 bp Feature: gene Location: 24336-26192 bp Feature: domain Description: SR_TndX_transposase Location: 24378-24792 bp Feature: domain Description: SR_TndX_transposase Location: 24378-24792 bp Feature: domain Description: Recombinase Location: 24897-25272 bp Feature: domain Description: Recombinase Location: 24897-25272 bp Feature: domain Description: Zn_ribbon_recom Location: 25311-25503 bp Feature: domain Description: Zn_ribbon_recom Location: 2531 1 -25503 bp Feature: domain Description: DUF4368 Location: 25779-25977 bp Feature: domain Description: DUF4368 Location: 25779-25977 bp Feature: gene Location: 26247-26438 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SSB_OBF (cd04496), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), SR_TndX_transposase (cd03770), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), DUF4368 (pfam14287)