myRT

myRT report for GCA_001183975.1_ASM118397v1

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Seq: LFZU01000001.1 Bacillus sp. FJAT-27231 Scaffold1, whole genome shotgun sequence (4254477 bp)
Overview 1 RT 1: 1455564-1466036 bp Neighborhood of RT #1 [1455564, 1466107] CsdA YolD RVT-GII Intron_maturas2 HNHc RVT-GII Intron_maturas2 HNHc PadR pip_yhgE_Nterm pip_yhgE_Cterm Feature: gene Location: 1455564-1457051 bp Feature: domain Description: CsdA Location: 1455618-1456944 bp Feature: domain Description: CsdA Location: 1 45561 8-1 456944 bp Feature: gene Location: 1457285-1457626 bp Feature: domain Description: YolD Location: 1457333-1457588 bp Feature: domain Description: YolD Location: 1 457333-1 457588 bp Feature: gene Location: 1458290-1460113 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1458557-1459349 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 458557-1 459349 bp Feature: domain Description: Intron_maturas2 Location: 1459517-1459736 bp Feature: domain Description: Intron_maturas2 Location: 1 45951 7-1 459736 bp Feature: domain Description: HNHc Note: nucleases Location: 1459895-1460078 bp Feature: domain Description: HNHc Note: nucleases Location: 1 459895-1 460078 bp Feature: gene Location: 1461423-1463234 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1461687-1462518 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 461 687-1 46251 8 bp Feature: domain Description: Intron_maturas2 Location: 1462593-1463019 bp Feature: domain Description: Intron_maturas2 Location: 1 462593-1 46301 9 bp Feature: domain Description: HNHc Note: nucleases Location: 1463046-1463208 bp Feature: domain Description: HNHc Note: nucleases Location: 1 463046-1 463208 bp Feature: gene Location: 1464348-1464887 bp Feature: domain Description: PadR Location: 1464357-1464684 bp Feature: domain Description: PadR Location: 1 464357-1 464684 bp Feature: gene Location: 1464932-1466107 bp Feature: domain Description: pip_yhgE_Nterm Location: 1464947-1465391 bp Feature: domain Description: pip_yhgE_Nterm Location: 1 464947-1 465391 bp Feature: domain Description: pip_yhgE_Cterm Location: 1465511-1466036 bp Feature: domain Description: pip_yhgE_Cterm Location: 1 46551 1 -1 466036 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CsdA (COG0520), YolD (pfam08863), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PadR (pfam03551), pip_yhgE_Nterm (TIGR03061), pip_yhgE_Cterm (TIGR03062)