myRT

myRT report for GCA_001184775.1_ASM118477v1

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Seq: KQ236698.1 Vibrio cholerae strain YN98296 chromosome I unlocalized genomic scaffold Scaffold_00011, whole genome shotgun sequence (150392 bp)
Overview 1 RT 1: 123304-129592 bp Neighborhood of RT #1 [123304, 129597] COG3950 RVT-Retrons LysR PRK10578 Feature: gene Location: 123304-123459 bp Feature: gene Location: 124194-125816 bp Ori: KKP19472.1 Feature: domain Description: COG3950 Location: 124380-125811 bp Feature: domain Description: COG3950 Location: 1 24380-1 2581 1 bp Feature: gene Location: 125817-126788 bp Ori: KKP19473.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 125955-126552 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 25955-1 26552 bp Feature: gene Location: 127965-128825 bp Ori: KKP19474.1 Feature: domain Description: LysR Location: 127971-128799 bp Feature: domain Description: LysR Location: 1 27971 -1 28799 bp Feature: gene Location: 128977-129597 bp Ori: KKP19475.1 Feature: domain Description: PRK10578 Location: 128992-129592 bp Feature: domain Description: PRK1 0578 Location: 1 28992-1 29592 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, LysR (COG0583), PRK10578 (hypothetical protein; Provisional)