myRT

myRT report for GCA_001185675.1_Kleb_pneu_CHS240_V1

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Seq: KQ236764.1 Klebsiella pneumoniae strain CHS240 genomic scaffold aeurE-supercont1.1, whole genome shotgun sequence (5582289 bp)
Overview 1 RT 1: 583426-586833 bp 2 RT 2: 1026066-1031671 bp 3 RT 3: 1369169-1374587 bp 4 RT 4: 1552696-1558561 bp 5 RT 5: 2928631-2935114 bp Neighborhood of RT #1 [583426, 586934] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1026066, 1031697] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1369169, 1374589] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1552696, 1558563] Rve PinE RVT-GII PRK10276 umuC Neighborhood of RT #5 [2928631, 2935116] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 583426-584157 bp Feature: domain Description: Laminin_G_3 Location: 583747-584101 bp Feature: domain Description: Laminin_G_3 Location: 583747-5841 01 bp Feature: gene Location: 584154-584363 bp Feature: gene Location: 584813-586300 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 585218-585908 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58521 8-585908 bp Feature: gene Location: 586378-586617 bp Feature: gene Location: 586617-586934 bp Feature: domain Description: PRK10276 Location: 586623-586737 bp Feature: domain Description: PRK1 0276 Location: 586623-586737 bp Feature: domain Description: PRK10276 Location: 586764-586833 bp Feature: domain Description: PRK1 0276 Location: 586764-586833 bp Feature: gene Location: 1026066-1026629 bp Feature: domain Description: YbjK Location: 1026072-1026609 bp Feature: domain Description: YbjK Location: 1 026072-1 026609 bp Feature: gene Location: 1026752-1027804 bp Feature: domain Description: int Location: 1026755-1027754 bp Feature: domain Description: int Location: 1 026755-1 027754 bp Feature: gene Location: 1028220-1029707 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1028625-1029315 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 028625-1 02931 5 bp Feature: gene Location: 1029806-1030750 bp Feature: gene Location: 1030762-1031697 bp Feature: domain Description: Phage_CI_repr Location: 1030846-1031029 bp Feature: domain Description: Phage_CI_repr Location: 1 030846-1 031 029 bp Feature: domain Description: Phage_CI_repr Location: 1031158-1031350 bp Feature: domain Description: Phage_CI_repr Location: 1 031 1 58-1 031 350 bp Feature: domain Description: Phage_CI_C Location: 1031377-1031671 bp Feature: domain Description: Phage_CI_C Location: 1 031 377-1 031 671 bp Feature: gene Location: 1369169-1370308 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1369352-1370252 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 369352-1 370252 bp Feature: gene Location: 1370479-1370721 bp Feature: domain Description: DinI Location: 1370530-1370710 bp Feature: domain Description: DinI Location: 1 370530-1 37071 0 bp Feature: gene Location: 1371336-1372823 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1371741-1372431 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 371 741 -1 372431 bp Feature: gene Location: 1372902-1373321 bp Feature: domain Description: PRK10276 Location: 1372905-1373316 bp Feature: domain Description: PRK1 0276 Location: 1 372905-1 37331 6 bp Feature: gene Location: 1373324-1374589 bp Feature: domain Description: umuC Location: 1373327-1374587 bp Feature: domain Description: umuC Location: 1 373327-1 374587 bp Feature: gene Location: 1552696-1553400 bp Feature: domain Description: Rve Location: 1552699-1553344 bp Feature: domain Description: Rve Location: 1 552699-1 553344 bp Feature: gene Location: 1553466-1553915 bp Feature: domain Description: PinE Location: 1553475-1553907 bp Feature: domain Description: PinE Location: 1 553475-1 553907 bp Feature: gene Location: 1555310-1556797 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1555715-1556405 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 55571 5-1 556405 bp Feature: gene Location: 1556790-1557296 bp Feature: domain Description: PRK10276 Location: 1556880-1557291 bp Feature: domain Description: PRK1 0276 Location: 1 556880-1 557291 bp Feature: gene Location: 1557298-1558563 bp Feature: domain Description: umuC Location: 1557301-1558561 bp Feature: domain Description: umuC Location: 1 557301 -1 558561 bp Feature: gene Location: 2928631-2929689 bp Feature: domain Description: YccC Location: 2928637-2929675 bp Feature: domain Description: YccC Location: 2928637-2929675 bp Feature: gene Location: 2929788-2930261 bp Feature: domain Description: PRK10016 Location: 2929791-2930250 bp Feature: domain Description: PRK1 001 6 Location: 2929791 -2930250 bp Feature: gene Location: 2930343-2931830 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2930748-2931438 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2930748-2931 438 bp Feature: gene Location: 2932348-2933511 bp Feature: domain Description: dacD Location: 2932351-2933506 bp Feature: domain Description: dacD Location: 2932351 -2933506 bp Feature: gene Location: 2933692-2935116 bp Feature: domain Description: SbcB Location: 2933698-2935114 bp Feature: domain Description: SbcB Location: 2933698-29351 1 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
Rve (COG3316), PinE (COG1961), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)

Seq: KQ236765.1 Klebsiella pneumoniae strain CHS240 genomic scaffold aeurE-supercont1.2, whole genome shotgun sequence (164023 bp)
Overview 1 RT 1: 143352-148346 bp Neighborhood of RT #1 [143352, 148348] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 143352-144623 bp Feature: domain Description: umuC Location: 143355-144618 bp Feature: domain Description: umuC Location: 143355-144618 bp Feature: gene Location: 144623-145048 bp Feature: domain Description: PRK10276 Location: 144626-145034 bp Feature: domain Description: PRK102 76 Location: 14462 6-145034 bp Feature: gene Location: 145451-146938 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 145856-146546 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 145856-146546 bp Feature: gene Location: 147172-147402 bp Feature: gene Location: 147923-148348 bp Feature: domain Description: Antirestrict Location: 148058-148346 bp Feature: domain Description: Antirestrict Location: 148058-148346 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: KQ236766.1 Klebsiella pneumoniae strain CHS240 genomic scaffold aeurE-supercont1.3, whole genome shotgun sequence (64893 bp)
Overview 1 RT 1: 10780-16133 bp Neighborhood of RT #1 [10780, 16270] umuC PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 10780-12051 bp Feature: domain Description: umuC Location: 10783-12043 bp Feature: domain Description: umuC Location: 10783 -12043 bp Feature: gene Location: 12051-12482 bp Feature: domain Description: PRK10276 Location: 12102-12465 bp Feature: domain Description: PRK10276 Location: 12102-12465 bp Feature: gene Location: 12565-14052 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12970-13660 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12970-13 660 bp Feature: gene Location: 14625-15596 bp Feature: domain Description: StbA Location: 14628-15573 bp Feature: domain Description: StbA Location: 14628-15573 bp Feature: gene Location: 15599-16270 bp Feature: domain Description: Plasmid_stab_B Location: 15614-15821 bp Feature: domain Description: Plasmid_stab_B Location: 15614-15821 bp Feature: domain Description: Plasmid_stab_B Location: 15926-16133 bp Feature: domain Description: Plasmid_stab_B Location: 15926-1613 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)