myRT

myRT report for GCA_001185685.1_Kleb_pneu_UCI69_V1

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Seq: KQ236771.1 Klebsiella pneumoniae strain UCI69 genomic scaffold aeusv-supercont1.1, whole genome shotgun sequence (4011442 bp)
Overview 1 RT 1: 330612-334019 bp 2 RT 2: 771960-777565 bp 3 RT 3: 1114798-1120216 bp 4 RT 4: 2612361-2618844 bp Neighborhood of RT #1 [330612, 334120] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [771960, 777591] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1114798, 1120218] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [2612361, 2618846] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 330612-331343 bp Feature: domain Description: Laminin_G_3 Location: 330933-331287 bp Feature: domain Description: Laminin_G_3 Location: 330933-331 287 bp Feature: gene Location: 331340-331549 bp Feature: gene Location: 332002-333486 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 332404-333094 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 332404-333094 bp Feature: gene Location: 333564-333803 bp Feature: gene Location: 333803-334120 bp Feature: domain Description: PRK10276 Location: 333809-333923 bp Feature: domain Description: PRK1 0276 Location: 333809-333923 bp Feature: domain Description: PRK10276 Location: 333950-334019 bp Feature: domain Description: PRK1 0276 Location: 333950-33401 9 bp Feature: gene Location: 771960-772523 bp Feature: domain Description: YbjK Location: 771966-772503 bp Feature: domain Description: YbjK Location: 771 966-772503 bp Feature: gene Location: 772646-773698 bp Feature: domain Description: int Location: 772649-773648 bp Feature: domain Description: int Location: 772649-773648 bp Feature: gene Location: 774117-775601 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774519-775209 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 77451 9-775209 bp Feature: gene Location: 775700-776644 bp Feature: gene Location: 776656-777591 bp Feature: domain Description: Phage_CI_repr Location: 776740-776923 bp Feature: domain Description: Phage_CI_repr Location: 776740-776923 bp Feature: domain Description: Phage_CI_repr Location: 777052-777244 bp Feature: domain Description: Phage_CI_repr Location: 777052-777244 bp Feature: domain Description: Phage_CI_C Location: 777271-777565 bp Feature: domain Description: Phage_CI_C Location: 777271 -777565 bp Feature: gene Location: 1114798-1115937 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1114981-1115881 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 1 1 4981 -1 1 1 5881 bp Feature: gene Location: 1116108-1116350 bp Feature: domain Description: DinI Location: 1116159-1116339 bp Feature: domain Description: DinI Location: 1 1 1 61 59-1 1 1 6339 bp Feature: gene Location: 1116968-1118452 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1117370-1118060 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 1 7370-1 1 1 8060 bp Feature: gene Location: 1118531-1118950 bp Feature: domain Description: PRK10276 Location: 1118534-1118945 bp Feature: domain Description: PRK1 0276 Location: 1 1 1 8534-1 1 1 8945 bp Feature: gene Location: 1118953-1120218 bp Feature: domain Description: umuC Location: 1118956-1120216 bp Feature: domain Description: umuC Location: 1 1 1 8956-1 1 2021 6 bp Feature: gene Location: 2612361-2613419 bp Feature: domain Description: YccC Location: 2612367-2613405 bp Feature: domain Description: YccC Location: 261 2367-261 3405 bp Feature: gene Location: 2613518-2613991 bp Feature: domain Description: PRK10016 Location: 2613521-2613980 bp Feature: domain Description: PRK1 001 6 Location: 261 3521 -261 3980 bp Feature: gene Location: 2614073-2615557 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2614475-2615165 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 261 4475-261 51 65 bp Feature: gene Location: 2616078-2617241 bp Feature: domain Description: dacD Location: 2616081-2617236 bp Feature: domain Description: dacD Location: 261 6081 -261 7236 bp Feature: gene Location: 2617422-2618846 bp Feature: domain Description: SbcB Location: 2617428-2618844 bp Feature: domain Description: SbcB Location: 261 7428-261 8844 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)

Seq: KQ236774.1 Klebsiella pneumoniae strain UCI69 genomic scaffold aeusv-supercont1.4, whole genome shotgun sequence (130807 bp)
Overview 1 RT 1: 73224-78218 bp Neighborhood of RT #1 [73224, 78220] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 73224-74495 bp Feature: domain Description: umuC Location: 73227-74490 bp Feature: domain Description: umuC Location: 732 2 7-74490 bp Feature: gene Location: 74495-74920 bp Feature: domain Description: PRK10276 Location: 74498-74906 bp Feature: domain Description: PRK102 76 Location: 74498-74906 bp Feature: gene Location: 75326-76810 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75728-76418 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7572 8-76418 bp Feature: gene Location: 77044-77274 bp Feature: gene Location: 77795-78220 bp Feature: domain Description: Antirestrict Location: 77930-78218 bp Feature: domain Description: Antirestrict Location: 77930-782 18 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)