myRT

myRT report for GCA_001185695.1_Kleb_pneu_CHS239_V1

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Seq: KQ236783.1 Klebsiella pneumoniae strain CHS239 genomic scaffold aeust-supercont1.2, whole genome shotgun sequence (2044248 bp)
Overview 1 RT 1: 583517-586924 bp 2 RT 2: 1026157-1031762 bp 3 RT 3: 1369328-1374746 bp 4 RT 4: 1552855-1558720 bp Neighborhood of RT #1 [583517, 587025] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1026157, 1031788] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1369328, 1374748] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1552855, 1558722] Rve PinE RVT-GII PRK10276 umuC Feature: gene Location: 583517-584248 bp Feature: domain Description: Laminin_G_3 Location: 583838-584192 bp Feature: domain Description: Laminin_G_3 Location: 583838-5841 92 bp Feature: gene Location: 584245-584454 bp Feature: gene Location: 584904-586391 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 585309-585999 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 585309-585999 bp Feature: gene Location: 586469-586708 bp Feature: gene Location: 586708-587025 bp Feature: domain Description: PRK10276 Location: 586714-586828 bp Feature: domain Description: PRK1 0276 Location: 58671 4-586828 bp Feature: domain Description: PRK10276 Location: 586855-586924 bp Feature: domain Description: PRK1 0276 Location: 586855-586924 bp Feature: gene Location: 1026157-1026720 bp Feature: domain Description: YbjK Location: 1026163-1026700 bp Feature: domain Description: YbjK Location: 1 0261 63-1 026700 bp Feature: gene Location: 1026843-1027895 bp Feature: domain Description: int Location: 1026846-1027845 bp Feature: domain Description: int Location: 1 026846-1 027845 bp Feature: gene Location: 1028311-1029798 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1028716-1029406 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 02871 6-1 029406 bp Feature: gene Location: 1029897-1030841 bp Feature: gene Location: 1030853-1031788 bp Feature: domain Description: Phage_CI_repr Location: 1030937-1031120 bp Feature: domain Description: Phage_CI_repr Location: 1 030937-1 031 1 20 bp Feature: domain Description: Phage_CI_repr Location: 1031249-1031441 bp Feature: domain Description: Phage_CI_repr Location: 1 031 249-1 031 441 bp Feature: domain Description: Phage_CI_C Location: 1031468-1031762 bp Feature: domain Description: Phage_CI_C Location: 1 031 468-1 031 762 bp Feature: gene Location: 1369328-1370467 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1369511-1370411 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 36951 1 -1 37041 1 bp Feature: gene Location: 1370638-1370880 bp Feature: domain Description: DinI Location: 1370689-1370869 bp Feature: domain Description: DinI Location: 1 370689-1 370869 bp Feature: gene Location: 1371495-1372982 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1371900-1372590 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 371 900-1 372590 bp Feature: gene Location: 1373061-1373480 bp Feature: domain Description: PRK10276 Location: 1373064-1373475 bp Feature: domain Description: PRK1 0276 Location: 1 373064-1 373475 bp Feature: gene Location: 1373483-1374748 bp Feature: domain Description: umuC Location: 1373486-1374746 bp Feature: domain Description: umuC Location: 1 373486-1 374746 bp Feature: gene Location: 1552855-1553559 bp Feature: domain Description: Rve Location: 1552858-1553503 bp Feature: domain Description: Rve Location: 1 552858-1 553503 bp Feature: gene Location: 1553625-1554074 bp Feature: domain Description: PinE Location: 1553634-1554066 bp Feature: domain Description: PinE Location: 1 553634-1 554066 bp Feature: gene Location: 1555469-1556956 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1555874-1556564 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 555874-1 556564 bp Feature: gene Location: 1556949-1557455 bp Feature: domain Description: PRK10276 Location: 1557039-1557450 bp Feature: domain Description: PRK1 0276 Location: 1 557039-1 557450 bp Feature: gene Location: 1557457-1558722 bp Feature: domain Description: umuC Location: 1557460-1558720 bp Feature: domain Description: umuC Location: 1 557460-1 558720 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
Rve (COG3316), PinE (COG1961)

Seq: KQ236788.1 Klebsiella pneumoniae strain CHS239 genomic scaffold aeust-supercont1.7, whole genome shotgun sequence (70846 bp)
Overview 1 RT 1: 13612-18965 bp Neighborhood of RT #1 [13612, 19102] umuC PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 13612-14883 bp Feature: domain Description: umuC Location: 13615-14875 bp Feature: domain Description: umuC Location: 13615-14875 bp Feature: gene Location: 14883-15314 bp Feature: domain Description: PRK10276 Location: 14934-15297 bp Feature: domain Description: PRK102 76 Location: 14934-152 97 bp Feature: gene Location: 15397-16884 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15802-16492 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15802 -16492 bp Feature: gene Location: 17457-18428 bp Feature: domain Description: StbA Location: 17460-18405 bp Feature: domain Description: StbA Location: 17460-18405 bp Feature: gene Location: 18431-19102 bp Feature: domain Description: Plasmid_stab_B Location: 18446-18653 bp Feature: domain Description: Plasmid_stab_B Location: 18446-18653 bp Feature: domain Description: Plasmid_stab_B Location: 18758-18965 bp Feature: domain Description: Plasmid_stab_B Location: 18758-18965 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)

Seq: KQ236782.1 Klebsiella pneumoniae strain CHS239 genomic scaffold aeust-supercont1.1, whole genome shotgun sequence (2795329 bp)
Overview 1 RT 1: 883505-889988 bp Neighborhood of RT #1 [883505, 889990] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 883505-884563 bp Feature: domain Description: YccC Location: 883511-884549 bp Feature: domain Description: YccC Location: 883 511-884549 bp Feature: gene Location: 884662-885135 bp Feature: domain Description: PRK10016 Location: 884665-885124 bp Feature: domain Description: PRK10016 Location: 884665-885124 bp Feature: gene Location: 885217-886704 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 885622-886312 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 885622-8863 12 bp Feature: gene Location: 887222-888385 bp Feature: domain Description: dacD Location: 887225-888380 bp Feature: domain Description: dacD Location: 887225-8883 80 bp Feature: gene Location: 888566-889990 bp Feature: domain Description: SbcB Location: 888572-889988 bp Feature: domain Description: SbcB Location: 888572-889988 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)

Seq: KQ236785.1 Klebsiella pneumoniae strain CHS239 genomic scaffold aeust-supercont1.4, whole genome shotgun sequence (156999 bp)
Overview 1 RT 1: 78823-83817 bp Neighborhood of RT #1 [78823, 83819] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 78823-80094 bp Feature: domain Description: umuC Location: 78826-80089 bp Feature: domain Description: umuC Location: 78826-80089 bp Feature: gene Location: 80094-80519 bp Feature: domain Description: PRK10276 Location: 80097-80505 bp Feature: domain Description: PRK10276 Location: 80097-80505 bp Feature: gene Location: 80922-82409 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81327-82017 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81327-82017 bp Feature: gene Location: 82643-82873 bp Feature: gene Location: 83394-83819 bp Feature: domain Description: Antirestrict Location: 83529-83817 bp Feature: domain Description: Antirestrict Location: 83529-83817 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)