myRT

myRT report for GCA_001185745.1_Kleb_pneu_CHS238_V1

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Seq: KQ236802.1 Klebsiella pneumoniae strain CHS238 genomic scaffold aeusd-supercont1.2, whole genome shotgun sequence (1442352 bp)
Overview 1 RT 1: 887701-894184 bp Neighborhood of RT #1 [887701, 894186] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 887701-888759 bp Feature: domain Description: YccC Location: 887707-888745 bp Feature: domain Description: YccC Location: 887707-888745 bp Feature: gene Location: 888858-889331 bp Feature: domain Description: PRK10016 Location: 888861-889320 bp Feature: domain Description: PRK1 001 6 Location: 888861 -889320 bp Feature: gene Location: 889413-890900 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 889818-890508 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88981 8-890508 bp Feature: gene Location: 891418-892581 bp Feature: domain Description: dacD Location: 891421-892576 bp Feature: domain Description: dacD Location: 891 421 -892576 bp Feature: gene Location: 892762-894186 bp Feature: domain Description: SbcB Location: 892768-894184 bp Feature: domain Description: SbcB Location: 892768-8941 84 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)

Seq: KQ236807.1 Klebsiella pneumoniae strain CHS238 genomic scaffold aeusd-supercont1.7, whole genome shotgun sequence (175301 bp)
Overview 1 RT 1: 117705-122699 bp Neighborhood of RT #1 [117705, 122701] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 117705-118976 bp Feature: domain Description: umuC Location: 117708-118971 bp Feature: domain Description: umuC Location: 117708-118971 bp Feature: gene Location: 118976-119401 bp Feature: domain Description: PRK10276 Location: 118979-119387 bp Feature: domain Description: PRK102 76 Location: 118979-119387 bp Feature: gene Location: 119804-121291 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 120209-120899 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 02 09-12 0899 bp Feature: gene Location: 121525-121755 bp Feature: gene Location: 122276-122701 bp Feature: domain Description: Antirestrict Location: 122411-122699 bp Feature: domain Description: Antirestrict Location: 12 2 411-12 2 699 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: KQ236801.1 Klebsiella pneumoniae strain CHS238 genomic scaffold aeusd-supercont1.1, whole genome shotgun sequence (1548999 bp)
Overview 1 RT 1: 586079-589486 bp 2 RT 2: 1028721-1034326 bp 3 RT 3: 1371961-1377379 bp Neighborhood of RT #1 [586079, 589587] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1028721, 1034352] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1371961, 1377381] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Feature: gene Location: 586079-586810 bp Feature: domain Description: Laminin_G_3 Location: 586400-586754 bp Feature: domain Description: Laminin_G_3 Location: 586400-586754 bp Feature: gene Location: 586807-587016 bp Feature: gene Location: 587466-588953 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 587871-588561 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 587871-588561 bp Feature: gene Location: 589031-589270 bp Feature: gene Location: 589270-589587 bp Feature: domain Description: PRK10276 Location: 589276-589390 bp Feature: domain Description: PRK10276 Location: 589276-5893 90 bp Feature: domain Description: PRK10276 Location: 589417-589486 bp Feature: domain Description: PRK10276 Location: 589417-589486 bp Feature: gene Location: 1028721-1029284 bp Feature: domain Description: YbjK Location: 1028727-1029264 bp Feature: domain Description: YbjK Location: 1028727-1029264 bp Feature: gene Location: 1029407-1030459 bp Feature: domain Description: int Location: 1029410-1030409 bp Feature: domain Description: int Location: 1029410-103 0409 bp Feature: gene Location: 1030875-1032362 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1031280-1031970 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 103 1280-103 1970 bp Feature: gene Location: 1032461-1033405 bp Feature: gene Location: 1033417-1034352 bp Feature: domain Description: Phage_CI_repr Location: 1033501-1033684 bp Feature: domain Description: Phage_CI_repr Location: 103 3 501-103 3 684 bp Feature: domain Description: Phage_CI_repr Location: 1033813-1034005 bp Feature: domain Description: Phage_CI_repr Location: 103 3 813 -103 4005 bp Feature: domain Description: Phage_CI_C Location: 1034032-1034326 bp Feature: domain Description: Phage_CI_C Location: 103 403 2-103 43 26 bp Feature: gene Location: 1371961-1373100 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1372144-1373044 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 13 72144-13 73 044 bp Feature: gene Location: 1373271-1373513 bp Feature: domain Description: DinI Location: 1373322-1373502 bp Feature: domain Description: DinI Location: 13 73 3 22-13 73 502 bp Feature: gene Location: 1374128-1375615 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1374533-1375223 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 7453 3 -13 75223 bp Feature: gene Location: 1375694-1376113 bp Feature: domain Description: PRK10276 Location: 1375697-1376108 bp Feature: domain Description: PRK10276 Location: 13 75697-13 76108 bp Feature: gene Location: 1376116-1377381 bp Feature: domain Description: umuC Location: 1376119-1377379 bp Feature: domain Description: umuC Location: 13 76119-13 773 79 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)

Seq: KQ236809.1 Klebsiella pneumoniae strain CHS238 genomic scaffold aeusd-supercont1.9, whole genome shotgun sequence (112328 bp)
Overview 1 RT 1: 31246-37111 bp Neighborhood of RT #1 [31246, 37113] Rve PinE RVT-GII PRK10276 umuC Feature: gene Location: 31246-31950 bp Feature: domain Description: Rve Location: 31249-31894 bp Feature: domain Description: Rve Location: 3124 9-31894 bp Feature: gene Location: 32016-32465 bp Feature: domain Description: PinE Location: 32025-32457 bp Feature: domain Description: PinE Location: 32025-324 57 bp Feature: gene Location: 33860-35347 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34265-34955 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34 265-34 955 bp Feature: gene Location: 35340-35846 bp Feature: domain Description: PRK10276 Location: 35430-35841 bp Feature: domain Description: PRK10276 Location: 354 30-3584 1 bp Feature: gene Location: 35848-37113 bp Feature: domain Description: umuC Location: 35851-37111 bp Feature: domain Description: umuC Location: 35851-37111 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rve (COG3316), PinE (COG1961), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)