myRT

myRT report for GCA_001185755.1_Kleb_pneu_CHS212_V1

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Seq: KQ236816.1 Klebsiella pneumoniae strain CHS212 genomic scaffold aetzv-supercont1.1, whole genome shotgun sequence (3417778 bp)
Overview 1 RT 1: 883810-890293 bp Neighborhood of RT #1 [883810, 890295] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 883810-884868 bp Feature: domain Description: YccC Location: 883816-884854 bp Feature: domain Description: YccC Location: 88381 6-884854 bp Feature: gene Location: 884967-885440 bp Feature: domain Description: PRK10016 Location: 884970-885429 bp Feature: domain Description: PRK1 001 6 Location: 884970-885429 bp Feature: gene Location: 885522-887009 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 885927-886617 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 885927-88661 7 bp Feature: gene Location: 887527-888690 bp Feature: domain Description: dacD Location: 887530-888685 bp Feature: domain Description: dacD Location: 887530-888685 bp Feature: gene Location: 888871-890295 bp Feature: domain Description: SbcB Location: 888877-890293 bp Feature: domain Description: SbcB Location: 888877-890293 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)

Seq: KQ236817.1 Klebsiella pneumoniae strain CHS212 genomic scaffold aetzv-supercont1.2, whole genome shotgun sequence (1797558 bp)
Overview 1 RT 1: 328877-332284 bp 2 RT 2: 771519-777124 bp 3 RT 3: 1115624-1121042 bp 4 RT 4: 1302136-1307435 bp Neighborhood of RT #1 [328877, 332385] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [771519, 777150] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1115624, 1121044] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1302136, 1307437] PinE RVT-GII PRK10276 umuC Feature: gene Location: 328877-329608 bp Feature: domain Description: Laminin_G_3 Location: 329198-329552 bp Feature: domain Description: Laminin_G_3 Location: 32 9198-32 9552 bp Feature: gene Location: 329605-329814 bp Feature: gene Location: 330264-331751 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 330669-331359 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 330669-331359 bp Feature: gene Location: 331829-332068 bp Feature: gene Location: 332068-332385 bp Feature: domain Description: PRK10276 Location: 332074-332188 bp Feature: domain Description: PRK102 76 Location: 332 074-332 188 bp Feature: domain Description: PRK10276 Location: 332215-332284 bp Feature: domain Description: PRK102 76 Location: 332 2 15-332 2 84 bp Feature: gene Location: 771519-772082 bp Feature: domain Description: YbjK Location: 771525-772062 bp Feature: domain Description: YbjK Location: 77152 5-772 062 bp Feature: gene Location: 772205-773257 bp Feature: domain Description: int Location: 772208-773207 bp Feature: domain Description: int Location: 772 2 08-7732 07 bp Feature: gene Location: 773673-775160 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774078-774768 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774078-774768 bp Feature: gene Location: 775259-776203 bp Feature: gene Location: 776215-777150 bp Feature: domain Description: Phage_CI_repr Location: 776299-776482 bp Feature: domain Description: Phage_CI_repr Location: 7762 99-776482 bp Feature: domain Description: Phage_CI_repr Location: 776611-776803 bp Feature: domain Description: Phage_CI_repr Location: 776611-776803 bp Feature: domain Description: Phage_CI_C Location: 776830-777124 bp Feature: domain Description: Phage_CI_C Location: 776830-77712 4 bp Feature: gene Location: 1115624-1116763 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1115807-1116707 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1115807-1116707 bp Feature: gene Location: 1116934-1117176 bp Feature: domain Description: DinI Location: 1116985-1117165 bp Feature: domain Description: DinI Location: 1116985-1117165 bp Feature: gene Location: 1117791-1119278 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1118196-1118886 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1118196-1118886 bp Feature: gene Location: 1119357-1119776 bp Feature: domain Description: PRK10276 Location: 1119360-1119771 bp Feature: domain Description: PRK102 76 Location: 1119360-1119771 bp Feature: gene Location: 1119779-1121044 bp Feature: domain Description: umuC Location: 1119782-1121042 bp Feature: domain Description: umuC Location: 1119782 -112 1042 bp Feature: gene Location: 1302136-1302274 bp Feature: gene Location: 1302340-1302789 bp Feature: domain Description: PinE Location: 1302349-1302781 bp Feature: domain Description: PinE Location: 1302 349-1302 781 bp Feature: gene Location: 1304184-1305671 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1304589-1305279 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1304589-13052 79 bp Feature: gene Location: 1305664-1306170 bp Feature: domain Description: PRK10276 Location: 1305754-1306165 bp Feature: domain Description: PRK102 76 Location: 1305754-1306165 bp Feature: gene Location: 1306172-1307437 bp Feature: domain Description: umuC Location: 1306175-1307435 bp Feature: domain Description: umuC Location: 1306175-1307435 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
PinE (COG1961)

Seq: KQ236819.1 Klebsiella pneumoniae strain CHS212 genomic scaffold aetzv-supercont1.4, whole genome shotgun sequence (172918 bp)
Overview 1 RT 1: 115334-120328 bp Neighborhood of RT #1 [115334, 120330] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 115334-116605 bp Feature: domain Description: umuC Location: 115337-116600 bp Feature: domain Description: umuC Location: 1153 3 7-116600 bp Feature: gene Location: 116605-117030 bp Feature: domain Description: PRK10276 Location: 116608-117016 bp Feature: domain Description: PRK10276 Location: 116608-117016 bp Feature: gene Location: 117433-118920 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 117838-118528 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11783 8-118528 bp Feature: gene Location: 119154-119384 bp Feature: gene Location: 119905-120330 bp Feature: domain Description: Antirestrict Location: 120040-120328 bp Feature: domain Description: Antirestrict Location: 120040-1203 28 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)