myRT

myRT report for GCA_001185765.1_Kleb_pneu_CHS198_V1

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Seq: KQ236833.1 Klebsiella pneumoniae strain CHS198 genomic scaffold aetAg-supercont1.4, whole genome shotgun sequence (278981 bp)
Overview 1 RT 1: 224185-229179 bp Neighborhood of RT #1 [224185, 229181] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 224185-225456 bp Feature: domain Description: umuC Location: 224188-225451 bp Feature: domain Description: umuC Location: 2241 88-225451 bp Feature: gene Location: 225456-225881 bp Feature: domain Description: PRK10276 Location: 225459-225867 bp Feature: domain Description: PRK1 0276 Location: 225459-225867 bp Feature: gene Location: 226284-227771 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 226689-227379 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 226689-227379 bp Feature: gene Location: 228005-228235 bp Feature: gene Location: 228756-229181 bp Feature: domain Description: Antirestrict Location: 228891-229179 bp Feature: domain Description: Antirestrict Location: 228891 -2291 79 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: KQ236830.1 Klebsiella pneumoniae strain CHS198 genomic scaffold aetAg-supercont1.1, whole genome shotgun sequence (4330356 bp)
Overview 1 RT 1: 583298-586705 bp 2 RT 2: 1026058-1031663 bp 3 RT 3: 1362024-1367442 bp 4 RT 4: 1545551-1551416 bp 5 RT 5: 2924751-2931234 bp Neighborhood of RT #1 [583298, 586806] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1026058, 1031689] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1362024, 1367444] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1545551, 1551418] Rve PinE RVT-GII PRK10276 umuC Neighborhood of RT #5 [2924751, 2931236] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 583298-584029 bp Feature: domain Description: Laminin_G_3 Location: 583619-583973 bp Feature: domain Description: Laminin_G_3 Location: 583619-583973 bp Feature: gene Location: 584026-584235 bp Feature: gene Location: 584685-586172 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 585090-585780 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 585090-585780 bp Feature: gene Location: 586250-586489 bp Feature: gene Location: 586489-586806 bp Feature: domain Description: PRK10276 Location: 586495-586609 bp Feature: domain Description: PRK102 76 Location: 586495-586609 bp Feature: domain Description: PRK10276 Location: 586636-586705 bp Feature: domain Description: PRK102 76 Location: 586636-586705 bp Feature: gene Location: 1026058-1026621 bp Feature: domain Description: YbjK Location: 1026064-1026601 bp Feature: domain Description: YbjK Location: 102 6064-102 6601 bp Feature: gene Location: 1026744-1027796 bp Feature: domain Description: int Location: 1026747-1027746 bp Feature: domain Description: int Location: 102 6747-102 7746 bp Feature: gene Location: 1028212-1029699 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1028617-1029307 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102 8617-102 9307 bp Feature: gene Location: 1029798-1030742 bp Feature: gene Location: 1030754-1031689 bp Feature: domain Description: Phage_CI_repr Location: 1030838-1031021 bp Feature: domain Description: Phage_CI_repr Location: 1030838-103102 1 bp Feature: domain Description: Phage_CI_repr Location: 1031150-1031342 bp Feature: domain Description: Phage_CI_repr Location: 1031150-1031342 bp Feature: domain Description: Phage_CI_C Location: 1031369-1031663 bp Feature: domain Description: Phage_CI_C Location: 1031369-1031663 bp Feature: gene Location: 1362024-1363163 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1362207-1363107 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1362 2 07-1363107 bp Feature: gene Location: 1363334-1363576 bp Feature: domain Description: DinI Location: 1363385-1363565 bp Feature: domain Description: DinI Location: 1363385-1363565 bp Feature: gene Location: 1364191-1365678 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1364596-1365286 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1364596-13652 86 bp Feature: gene Location: 1365757-1366176 bp Feature: domain Description: PRK10276 Location: 1365760-1366171 bp Feature: domain Description: PRK102 76 Location: 1365760-1366171 bp Feature: gene Location: 1366179-1367444 bp Feature: domain Description: umuC Location: 1366182-1367442 bp Feature: domain Description: umuC Location: 1366182 -1367442 bp Feature: gene Location: 1545551-1546255 bp Feature: domain Description: Rve Location: 1545554-1546199 bp Feature: domain Description: Rve Location: 1545554-1546199 bp Feature: gene Location: 1546321-1546770 bp Feature: domain Description: PinE Location: 1546330-1546762 bp Feature: domain Description: PinE Location: 1546330-1546762 bp Feature: gene Location: 1548165-1549652 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1548570-1549260 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1548570-15492 60 bp Feature: gene Location: 1549645-1550151 bp Feature: domain Description: PRK10276 Location: 1549735-1550146 bp Feature: domain Description: PRK102 76 Location: 1549735-1550146 bp Feature: gene Location: 1550153-1551418 bp Feature: domain Description: umuC Location: 1550156-1551416 bp Feature: domain Description: umuC Location: 1550156-1551416 bp Feature: gene Location: 2924751-2925809 bp Feature: domain Description: YccC Location: 2924757-2925795 bp Feature: domain Description: YccC Location: 2 92 4757-2 92 5795 bp Feature: gene Location: 2925908-2926381 bp Feature: domain Description: PRK10016 Location: 2925911-2926370 bp Feature: domain Description: PRK10016 Location: 2 92 5911-2 92 6370 bp Feature: gene Location: 2926463-2927950 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2926868-2927558 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 92 6868-2 92 7558 bp Feature: gene Location: 2928468-2929631 bp Feature: domain Description: dacD Location: 2928471-2929626 bp Feature: domain Description: dacD Location: 2 92 8471-2 92 962 6 bp Feature: gene Location: 2929812-2931236 bp Feature: domain Description: SbcB Location: 2929818-2931234 bp Feature: domain Description: SbcB Location: 2 92 9818-2 9312 34 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
Rve (COG3316), PinE (COG1961), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)