myRT

myRT report for GCA_001185825.1_Kleb_pneu_CHS187_V1

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Seq: KQ236837.1 Klebsiella pneumoniae strain CHS187 genomic scaffold aetzZ-supercont1.1, whole genome shotgun sequence (3367444 bp)
Overview 1 RT 1: 715059-721542 bp Neighborhood of RT #1 [715059, 721544] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 715059-716117 bp Feature: domain Description: YccC Location: 715065-716103 bp Feature: domain Description: YccC Location: 71 5065-71 61 03 bp Feature: gene Location: 716216-716689 bp Feature: domain Description: PRK10016 Location: 716219-716678 bp Feature: domain Description: PRK1 001 6 Location: 71 621 9-71 6678 bp Feature: gene Location: 716771-718258 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 717176-717866 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71 71 76-71 7866 bp Feature: gene Location: 718776-719939 bp Feature: domain Description: dacD Location: 718779-719934 bp Feature: domain Description: dacD Location: 71 8779-71 9934 bp Feature: gene Location: 720120-721544 bp Feature: domain Description: SbcB Location: 720126-721542 bp Feature: domain Description: SbcB Location: 7201 26-721 542 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)

Seq: KQ236840.1 Klebsiella pneumoniae strain CHS187 genomic scaffold aetzZ-supercont1.4, whole genome shotgun sequence (81423 bp)
Overview 1 RT 1: 32467-39718 bp Neighborhood of RT #1 [32467, 39855] umuC PRK10276 RVT-GII RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 32467-33738 bp Feature: domain Description: umuC Location: 32470-33730 bp Feature: domain Description: umuC Location: 32 470-33730 bp Feature: gene Location: 33738-34169 bp Feature: domain Description: PRK10276 Location: 33789-34152 bp Feature: domain Description: PRK102 76 Location: 33789-34152 bp Feature: gene Location: 34252-35739 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34657-35347 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34657-35347 bp Feature: gene Location: 36150-37637 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36555-37245 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36555-372 45 bp Feature: gene Location: 38210-39181 bp Feature: domain Description: StbA Location: 38213-39158 bp Feature: domain Description: StbA Location: 382 13-39158 bp Feature: gene Location: 39184-39855 bp Feature: domain Description: Plasmid_stab_B Location: 39199-39406 bp Feature: domain Description: Plasmid_stab_B Location: 39199-39406 bp Feature: domain Description: Plasmid_stab_B Location: 39511-39718 bp Feature: domain Description: Plasmid_stab_B Location: 39511-39718 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)

Seq: KQ236839.1 Klebsiella pneumoniae strain CHS187 genomic scaffold aetzZ-supercont1.3, whole genome shotgun sequence (144381 bp)
Overview 1 RT 1: 83699-90591 bp Neighborhood of RT #1 [83699, 90593] umuC PRK10276 RVT-GII RVT-GII Antirestrict Feature: gene Location: 83699-84970 bp Feature: domain Description: umuC Location: 83702-84965 bp Feature: domain Description: umuC Location: 83 702-84965 bp Feature: gene Location: 84970-85395 bp Feature: domain Description: PRK10276 Location: 84973-85381 bp Feature: domain Description: PRK10276 Location: 84973 -853 81 bp Feature: gene Location: 85798-87285 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 86203-86893 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 86203 -86893 bp Feature: gene Location: 87696-89183 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88101-88791 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88101-88791 bp Feature: gene Location: 89417-89647 bp Feature: gene Location: 90168-90593 bp Feature: domain Description: Antirestrict Location: 90303-90591 bp Feature: domain Description: Antirestrict Location: 903 03 -90591 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: KQ236838.1 Klebsiella pneumoniae strain CHS187 genomic scaffold aetzZ-supercont1.2, whole genome shotgun sequence (2051696 bp)
Overview 1 RT 1: 587983-591390 bp 2 RT 2: 1039470-1044977 bp 3 RT 3: 1376108-1381526 bp 4 RT 4: 1563381-1568696 bp Neighborhood of RT #1 [587983, 591491] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1039470, 1044982] dam Phage_GPA RVT-GII DinI Neighborhood of RT #3 [1376108, 1381528] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1563381, 1568698] PinE RVT-GII PRK10276 umuC Feature: gene Location: 587983-588714 bp Feature: domain Description: Laminin_G_3 Location: 588304-588658 bp Feature: domain Description: Laminin_G_3 Location: 588304 -588658 bp Feature: gene Location: 588711-588920 bp Feature: gene Location: 589370-590857 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 589775-590465 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 589775-5904 65 bp Feature: gene Location: 590935-591174 bp Feature: gene Location: 591174-591491 bp Feature: domain Description: PRK10276 Location: 591180-591294 bp Feature: domain Description: PRK10276 Location: 591180-591294 bp Feature: domain Description: PRK10276 Location: 591321-591390 bp Feature: domain Description: PRK10276 Location: 591321-591390 bp Feature: gene Location: 1039470-1040075 bp Feature: domain Description: dam Location: 1039476-1039998 bp Feature: domain Description: dam Location: 10394 76-1039998 bp Feature: gene Location: 1040072-1042486 bp Feature: domain Description: Phage_GPA Location: 1040636-1041602 bp Feature: domain Description: Phage_GPA Location: 104 0636-104 1602 bp Feature: gene Location: 1042962-1044449 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1043367-1044057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 104 3367-104 4 057 bp Feature: gene Location: 1044550-1044738 bp Feature: gene Location: 1044749-1044982 bp Feature: domain Description: DinI Location: 1044791-1044977 bp Feature: domain Description: DinI Location: 104 4 791-104 4 977 bp Feature: gene Location: 1376108-1377247 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1376291-1377191 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1376291-1377191 bp Feature: gene Location: 1377418-1377660 bp Feature: domain Description: DinI Location: 1377469-1377649 bp Feature: domain Description: DinI Location: 13774 69-137764 9 bp Feature: gene Location: 1378275-1379762 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1378680-1379370 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1378680-1379370 bp Feature: gene Location: 1379841-1380260 bp Feature: domain Description: PRK10276 Location: 1379844-1380255 bp Feature: domain Description: PRK10276 Location: 137984 4 -1380255 bp Feature: gene Location: 1380263-1381528 bp Feature: domain Description: umuC Location: 1380266-1381526 bp Feature: domain Description: umuC Location: 1380266-1381526 bp Feature: gene Location: 1563381-1563535 bp Feature: gene Location: 1563601-1564050 bp Feature: domain Description: PinE Location: 1563610-1564042 bp Feature: domain Description: PinE Location: 1563610-1564 04 2 bp Feature: gene Location: 1565445-1566932 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1565850-1566540 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1565850-156654 0 bp Feature: gene Location: 1566925-1567431 bp Feature: domain Description: PRK10276 Location: 1567015-1567426 bp Feature: domain Description: PRK10276 Location: 1567015-15674 26 bp Feature: gene Location: 1567433-1568698 bp Feature: domain Description: umuC Location: 1567436-1568696 bp Feature: domain Description: umuC Location: 15674 36-1568696 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), dam (TIGR00571), Phage_GPA (pfam05840), DinI (pfam06183), GT9_LPS_heptosyltransferase (cd03789), umuC (PRK03609), PinE (COG1961)