myRT

myRT report for GCA_001185835.1_Kleb_pneu_CHS178_V1

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Seq: KQ236845.1 Klebsiella pneumoniae strain CHS178 genomic scaffold aetAK-supercont1.2, whole genome shotgun sequence (1768250 bp)
Overview 1 RT 1: 586314-589721 bp 2 RT 2: 1029444-1035049 bp 3 RT 3: 1373028-1378446 bp 4 RT 4: 1649850-1654844 bp Neighborhood of RT #1 [586314, 589822] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1029444, 1035075] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1373028, 1378448] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1649850, 1654846] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 586314-587045 bp Feature: domain Description: Laminin_G_3 Location: 586635-586989 bp Feature: domain Description: Laminin_G_3 Location: 586635-586989 bp Feature: gene Location: 587042-587251 bp Feature: gene Location: 587701-589188 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 588106-588796 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5881 06-588796 bp Feature: gene Location: 589266-589505 bp Feature: gene Location: 589505-589822 bp Feature: domain Description: PRK10276 Location: 589511-589625 bp Feature: domain Description: PRK1 0276 Location: 58951 1 -589625 bp Feature: domain Description: PRK10276 Location: 589652-589721 bp Feature: domain Description: PRK1 0276 Location: 589652-589721 bp Feature: gene Location: 1029444-1030007 bp Feature: domain Description: YbjK Location: 1029450-1029987 bp Feature: domain Description: YbjK Location: 1 029450-1 029987 bp Feature: gene Location: 1030130-1031182 bp Feature: domain Description: int Location: 1030133-1031132 bp Feature: domain Description: int Location: 1 0301 33-1 031 1 32 bp Feature: gene Location: 1031598-1033085 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1032003-1032693 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 032003-1 032693 bp Feature: gene Location: 1033184-1034128 bp Feature: gene Location: 1034140-1035075 bp Feature: domain Description: Phage_CI_repr Location: 1034224-1034407 bp Feature: domain Description: Phage_CI_repr Location: 1 034224-1 034407 bp Feature: domain Description: Phage_CI_repr Location: 1034536-1034728 bp Feature: domain Description: Phage_CI_repr Location: 1 034536-1 034728 bp Feature: domain Description: Phage_CI_C Location: 1034755-1035049 bp Feature: domain Description: Phage_CI_C Location: 1 034755-1 035049 bp Feature: gene Location: 1373028-1374167 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1373211-1374111 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 37321 1 -1 3741 1 1 bp Feature: gene Location: 1374338-1374580 bp Feature: domain Description: DinI Location: 1374389-1374569 bp Feature: domain Description: DinI Location: 1 374389-1 374569 bp Feature: gene Location: 1375195-1376682 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1375600-1376290 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 375600-1 376290 bp Feature: gene Location: 1376761-1377180 bp Feature: domain Description: PRK10276 Location: 1376764-1377175 bp Feature: domain Description: PRK1 0276 Location: 1 376764-1 3771 75 bp Feature: gene Location: 1377183-1378448 bp Feature: domain Description: umuC Location: 1377186-1378446 bp Feature: domain Description: umuC Location: 1 3771 86-1 378446 bp Feature: gene Location: 1649850-1651121 bp Feature: domain Description: umuC Location: 1649853-1651116 bp Feature: domain Description: umuC Location: 1 649853-1 651 1 1 6 bp Feature: gene Location: 1651121-1651546 bp Feature: domain Description: PRK10276 Location: 1651124-1651532 bp Feature: domain Description: PRK1 0276 Location: 1 651 1 24-1 651 532 bp Feature: gene Location: 1651949-1653436 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1652354-1653044 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 652354-1 653044 bp Feature: gene Location: 1653670-1653900 bp Feature: gene Location: 1654421-1654846 bp Feature: domain Description: Antirestrict Location: 1654556-1654844 bp Feature: domain Description: Antirestrict Location: 1 654556-1 654844 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
Antirestrict (pfam03230)

Seq: KQ236844.1 Klebsiella pneumoniae strain CHS178 genomic scaffold aetAK-supercont1.1, whole genome shotgun sequence (2999400 bp)
Overview 1 RT 1: 885029-891512 bp Neighborhood of RT #1 [885029, 891514] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 885029-886087 bp Feature: domain Description: YccC Location: 885035-886073 bp Feature: domain Description: YccC Location: 885035-886073 bp Feature: gene Location: 886186-886659 bp Feature: domain Description: PRK10016 Location: 886189-886648 bp Feature: domain Description: PRK10016 Location: 886189-886648 bp Feature: gene Location: 886741-888228 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 887146-887836 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 887146-887836 bp Feature: gene Location: 888746-889909 bp Feature: domain Description: dacD Location: 888749-889904 bp Feature: domain Description: dacD Location: 888749-889904 bp Feature: gene Location: 890090-891514 bp Feature: domain Description: SbcB Location: 890096-891512 bp Feature: domain Description: SbcB Location: 890096-891512 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)

Seq: KQ236847.1 Klebsiella pneumoniae strain CHS178 genomic scaffold aetAK-supercont1.4, whole genome shotgun sequence (490477 bp)
Overview 1 RT 1: 4378-10243 bp Neighborhood of RT #1 [4378, 10245] Rve PinE RVT-GII PRK10276 umuC Feature: gene Location: 4378-5082 bp Feature: domain Description: Rve Location: 4381-5026 bp Feature: domain Description: Rve Location: 43 81-5026 bp Feature: gene Location: 5148-5597 bp Feature: domain Description: PinE Location: 5157-5589 bp Feature: domain Description: PinE Location: 5157-5589 bp Feature: gene Location: 6992-8479 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7397-8087 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73 97-8087 bp Feature: gene Location: 8472-8978 bp Feature: domain Description: PRK10276 Location: 8562-8973 bp Feature: domain Description: PRK10276 Location: 8562-8973 bp Feature: gene Location: 8980-10245 bp Feature: domain Description: umuC Location: 8983-10243 bp Feature: domain Description: umuC Location: 8983 -10243 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rve (COG3316), PinE (COG1961), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)