myRT

myRT report for GCA_001185865.1_Kleb_pneu_CHS175_V1

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Seq: KQ236854.1 Klebsiella pneumoniae strain CHS175 genomic scaffold aetyJ-supercont1.2, whole genome shotgun sequence (759176 bp)
Overview 1 RT 1: 479545-488163 bp Neighborhood of RT #1 [479545, 488180] YqgA PRK09692 RVT-UG4 FimD FimC Feature: gene Location: 479545-480258 bp Ori: KMX42608.1 Feature: domain Description: YqgA Location: 479551-480253 bp Feature: domain Description: YqgA Location: 479551 -480253 bp Feature: gene Location: 481076-481939 bp Ori: KMX42609.1 Feature: domain Description: PRK09692 Location: 481100-481937 bp Feature: domain Description: PRK09692 Location: 481 1 00-481 937 bp Feature: gene Location: 482697-484778 bp Ori: KMX42610.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 483108-483552 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 4831 08-483552 bp Feature: gene Location: 484775-487369 bp Ori: KMX42611.1 Feature: domain Description: FimD Location: 484817-487358 bp Feature: domain Description: FimD Location: 48481 7-487358 bp Feature: gene Location: 487416-488180 bp Ori: KMX42612.1 Feature: domain Description: FimC Location: 487461-488163 bp Feature: domain Description: FimC Location: 487461 -4881 63 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YqgA (COG1811), PRK09692 (Integrase; provisional), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: KQ236853.1 Klebsiella pneumoniae strain CHS175 genomic scaffold aetyJ-supercont1.1, whole genome shotgun sequence (3154819 bp)
Overview 1 RT 1: 2444446-2447598 bp 2 RT 2: 2573256-2579739 bp 3 RT 3: 3080628-3083774 bp 4 RT 4: 3114144-3118687 bp Neighborhood of RT #1 [2444446, 2447598] PRK10276 RVT-GII Neighborhood of RT #2 [2573256, 2579741] YccC PRK10016 RVT-GII dacD SbcB Neighborhood of RT #3 [3080628, 3083774] PRK10276 RVT-GII Neighborhood of RT #4 [3114144, 3118687] DUF1367 PRK10597 RVT-GII DUF551 Feature: gene Location: 2444446-2444763 bp Ori: KMX44182.1 Feature: domain Description: PRK10276 Location: 2444452-2444569 bp Feature: domain Description: PRK102 76 Location: 2 444452 -2 444569 bp Feature: gene Location: 2444763-2445002 bp Feature: gene Location: 2445080-2446567 bp Ori: KMX44184.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2445485-2446175 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 445485-2 446175 bp Feature: gene Location: 2446970-2447185 bp Feature: gene Location: 2447269-2447598 bp Feature: gene Location: 2573256-2574314 bp Ori: KMX44328.1 Feature: domain Description: YccC Location: 2573262-2574300 bp Feature: domain Description: YccC Location: 2 5732 62 -2 574300 bp Feature: gene Location: 2574413-2574886 bp Ori: KMX44329.1 Feature: domain Description: PRK10016 Location: 2574416-2574875 bp Feature: domain Description: PRK10016 Location: 2 574416-2 574875 bp Feature: gene Location: 2574968-2576455 bp Ori: KMX44330.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2575373-2576063 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 575373-2 576063 bp Feature: gene Location: 2576973-2578136 bp Ori: KMX44331.1 Feature: domain Description: dacD Location: 2576976-2578131 bp Feature: domain Description: dacD Location: 2 576976-2 578131 bp Feature: gene Location: 2578317-2579741 bp Ori: KMX44332.1 Feature: domain Description: SbcB Location: 2578323-2579739 bp Feature: domain Description: SbcB Location: 2 57832 3-2 579739 bp Feature: gene Location: 3080628-3080993 bp Ori: KMX43712.1 Feature: domain Description: PRK10276 Location: 3080673-3080796 bp Feature: domain Description: PRK102 76 Location: 3080673-3080796 bp Feature: gene Location: 3080950-3081189 bp Feature: gene Location: 3082109-3082743 bp Ori: KMX43444.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3082514-3082742 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3082 514-3082 742 bp Feature: gene Location: 3083146-3083361 bp Feature: gene Location: 3083445-3083774 bp Feature: gene Location: 3114144-3114740 bp Ori: KMX43483.1 Feature: domain Description: DUF1367 Location: 3114147-3114732 bp Feature: domain Description: DUF1367 Location: 3114147-3114732 bp Feature: gene Location: 3115130-3115363 bp Ori: KMX43484.1 Feature: domain Description: PRK10597 Location: 3115133-3115358 bp Feature: domain Description: PRK10597 Location: 3115133-3115358 bp Feature: gene Location: 3115442-3116929 bp Ori: KMX43485.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3115847-3116537 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3115847-3116537 bp Feature: gene Location: 3118035-3118511 bp Ori: KMX43486.1 Feature: domain Description: DUF551 Location: 3118296-3118494 bp Feature: domain Description: DUF551 Location: 31182 96-3118494 bp Feature: gene Location: 3118508-3118687 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925), DUF1367 (pfam07105), PRK10597 (DNA damage-inducible protein I; Provisional), DUF551 (pfam04448)