myRT

myRT report for GCA_001185895.1_Kleb_pneu_CHS171_V1

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Seq: KQ236869.1 Klebsiella pneumoniae strain CHS171 genomic scaffold aetzH-supercont1.1, whole genome shotgun sequence (4911856 bp)
Overview 1 RT 1: 586637-590044 bp 2 RT 2: 1030725-1036330 bp 3 RT 3: 1370211-1375629 bp 4 RT 4: 1555399-1560843 bp 5 RT 5: 2756089-2762572 bp Neighborhood of RT #1 [586637, 590145] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1030725, 1036356] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1370211, 1375631] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1555399, 1560845] PinE RVT-GII PRK10276 umuC Neighborhood of RT #5 [2756089, 2762574] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 586637-587368 bp Feature: domain Description: Laminin_G_3 Location: 586958-587312 bp Feature: domain Description: Laminin_G_3 Location: 586958-58731 2 bp Feature: gene Location: 587365-587574 bp Feature: gene Location: 588024-589511 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 588429-589119 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 588429-5891 1 9 bp Feature: gene Location: 589589-589828 bp Feature: gene Location: 589828-590145 bp Feature: domain Description: PRK10276 Location: 589834-589948 bp Feature: domain Description: PRK1 0276 Location: 589834-589948 bp Feature: domain Description: PRK10276 Location: 589975-590044 bp Feature: domain Description: PRK1 0276 Location: 589975-590044 bp Feature: gene Location: 1030725-1031288 bp Feature: domain Description: YbjK Location: 1030731-1031268 bp Feature: domain Description: YbjK Location: 1 030731 -1 031 268 bp Feature: gene Location: 1031411-1032463 bp Feature: domain Description: int Location: 1031414-1032413 bp Feature: domain Description: int Location: 1 031 41 4-1 03241 3 bp Feature: gene Location: 1032879-1034366 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1033284-1033974 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 033284-1 033974 bp Feature: gene Location: 1034465-1035409 bp Feature: gene Location: 1035421-1036356 bp Feature: domain Description: Phage_CI_repr Location: 1035505-1035688 bp Feature: domain Description: Phage_CI_repr Location: 1 035505-1 035688 bp Feature: domain Description: Phage_CI_repr Location: 1035817-1036009 bp Feature: domain Description: Phage_CI_repr Location: 1 03581 7-1 036009 bp Feature: domain Description: Phage_CI_C Location: 1036036-1036330 bp Feature: domain Description: Phage_CI_C Location: 1 036036-1 036330 bp Feature: gene Location: 1370211-1371350 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1370394-1371294 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 370394-1 371 294 bp Feature: gene Location: 1371521-1371763 bp Feature: domain Description: DinI Location: 1371572-1371752 bp Feature: domain Description: DinI Location: 1 371 572-1 371 752 bp Feature: gene Location: 1372378-1373865 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1372783-1373473 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 372783-1 373473 bp Feature: gene Location: 1373944-1374363 bp Feature: domain Description: PRK10276 Location: 1373947-1374358 bp Feature: domain Description: PRK1 0276 Location: 1 373947-1 374358 bp Feature: gene Location: 1374366-1375631 bp Feature: domain Description: umuC Location: 1374369-1375629 bp Feature: domain Description: umuC Location: 1 374369-1 375629 bp Feature: gene Location: 1555399-1555682 bp Feature: gene Location: 1555748-1556197 bp Feature: domain Description: PinE Location: 1555757-1556189 bp Feature: domain Description: PinE Location: 1 555757-1 5561 89 bp Feature: gene Location: 1557592-1559079 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1557997-1558687 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 557997-1 558687 bp Feature: gene Location: 1559072-1559578 bp Feature: domain Description: PRK10276 Location: 1559162-1559573 bp Feature: domain Description: PRK1 0276 Location: 1 5591 62-1 559573 bp Feature: gene Location: 1559580-1560845 bp Feature: domain Description: umuC Location: 1559583-1560843 bp Feature: domain Description: umuC Location: 1 559583-1 560843 bp Feature: gene Location: 2756089-2757147 bp Feature: domain Description: YccC Location: 2756095-2757133 bp Feature: domain Description: YccC Location: 2756095-27571 33 bp Feature: gene Location: 2757246-2757719 bp Feature: domain Description: PRK10016 Location: 2757249-2757708 bp Feature: domain Description: PRK1 001 6 Location: 2757249-2757708 bp Feature: gene Location: 2757801-2759288 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2758206-2758896 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2758206-2758896 bp Feature: gene Location: 2759806-2760969 bp Feature: domain Description: dacD Location: 2759809-2760964 bp Feature: domain Description: dacD Location: 2759809-2760964 bp Feature: gene Location: 2761150-2762574 bp Feature: domain Description: SbcB Location: 2761156-2762572 bp Feature: domain Description: SbcB Location: 2761 1 56-2762572 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
PinE (COG1961), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)

Seq: KQ236871.1 Klebsiella pneumoniae strain CHS171 genomic scaffold aetzH-supercont1.3, whole genome shotgun sequence (209917 bp)
Overview 1 RT 1: 21651-26645 bp Neighborhood of RT #1 [21651, 26647] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 21651-22922 bp Feature: domain Description: umuC Location: 21654-22917 bp Feature: domain Description: umuC Location: 2 1654-2 2 917 bp Feature: gene Location: 22922-23347 bp Feature: domain Description: PRK10276 Location: 22925-23333 bp Feature: domain Description: PRK102 76 Location: 2 2 92 5-2 3333 bp Feature: gene Location: 23750-25237 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24155-24845 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 4155-2 4845 bp Feature: gene Location: 25471-25701 bp Feature: gene Location: 26222-26647 bp Feature: domain Description: Antirestrict Location: 26357-26645 bp Feature: domain Description: Antirestrict Location: 2 6357-2 6645 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)