myRT

myRT report for GCA_001185915.1_Kleb_pneu_CHS136_V1

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Seq: KQ236882.1 Klebsiella pneumoniae strain CHS136 genomic scaffold aetAz-supercont1.9, whole genome shotgun sequence (52605 bp)
Overview 1 RT 1: 27205-32558 bp Neighborhood of RT #1 [27205, 32695] umuC PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 27205-28476 bp Feature: domain Description: umuC Location: 27208-28468 bp Feature: domain Description: umuC Location: 27208-28468 bp Feature: gene Location: 28476-28907 bp Feature: domain Description: PRK10276 Location: 28527-28890 bp Feature: domain Description: PRK1 0276 Location: 28527-28890 bp Feature: gene Location: 29314-30801 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29719-30409 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2971 9-30409 bp Feature: gene Location: 31050-32021 bp Feature: domain Description: StbA Location: 31053-31998 bp Feature: domain Description: StbA Location: 31 053-31 998 bp Feature: gene Location: 32024-32695 bp Feature: domain Description: Plasmid_stab_B Location: 32039-32246 bp Feature: domain Description: Plasmid_stab_B Location: 32039-32246 bp Feature: domain Description: Plasmid_stab_B Location: 32351-32558 bp Feature: domain Description: Plasmid_stab_B Location: 32351 -32558 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)

Seq: KQ236874.1 Klebsiella pneumoniae strain CHS136 genomic scaffold aetAz-supercont1.1, whole genome shotgun sequence (3204562 bp)
Overview 1 RT 1: 1037551-1043417 bp 2 RT 2: 1410656-1416073 bp 3 RT 3: 2692675-2699158 bp Neighborhood of RT #1 [1037551, 1043422] RVT-Retrons Q P Neighborhood of RT #2 [1410656, 1416075] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #3 [2692675, 2699160] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 1037551-1038393 bp Feature: gene Location: 1038612-1039664 bp Feature: gene Location: 1039666-1040595 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1039765-1040350 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1039765-1040350 bp Feature: gene Location: 1040631-1041656 bp Feature: domain Description: Q Location: 1040634-1041648 bp Feature: domain Description: Q Location: 1040634-1041648 bp Feature: gene Location: 1041656-1043422 bp Feature: domain Description: P Location: 1041680-1043417 bp Feature: domain Description: P Location: 1041680-1043417 bp Feature: gene Location: 1410656-1411795 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1410839-1411739 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1410839-1411739 bp Feature: gene Location: 1411966-1412208 bp Feature: domain Description: DinI Location: 1412017-1412197 bp Feature: domain Description: DinI Location: 1412 017-1412 197 bp Feature: gene Location: 1412822-1414309 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1413227-1413917 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14132 2 7-1413917 bp Feature: gene Location: 1414388-1414807 bp Feature: domain Description: PRK10276 Location: 1414391-1414802 bp Feature: domain Description: PRK102 76 Location: 1414391-1414802 bp Feature: gene Location: 1414810-1416075 bp Feature: domain Description: umuC Location: 1414813-1416073 bp Feature: domain Description: umuC Location: 1414813-1416073 bp Feature: gene Location: 2692675-2693733 bp Feature: domain Description: YccC Location: 2692681-2693719 bp Feature: domain Description: YccC Location: 2 692 681-2 693719 bp Feature: gene Location: 2693833-2694306 bp Feature: domain Description: PRK10016 Location: 2693836-2694295 bp Feature: domain Description: PRK10016 Location: 2 693836-2 6942 95 bp Feature: gene Location: 2694388-2695875 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2694793-2695483 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 694793-2 695483 bp Feature: gene Location: 2696392-2697555 bp Feature: domain Description: dacD Location: 2696395-2697550 bp Feature: domain Description: dacD Location: 2 696395-2 697550 bp Feature: gene Location: 2697736-2699160 bp Feature: domain Description: SbcB Location: 2697742-2699158 bp Feature: domain Description: SbcB Location: 2 697742 -2 699158 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, Q (PHA02536), P (PHA02535), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC)
dacD (PRK11397), SbcB (COG2925)