myRT

myRT report for GCA_001185925.1_Kleb_pneu_CHS130_V1

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Seq: KQ236888.1 Klebsiella pneumoniae strain CHS130 genomic scaffold aetyA-supercont1.2, whole genome shotgun sequence (1516937 bp)
Overview 1 RT 1: 585459-588866 bp 2 RT 2: 1028101-1033706 bp 3 RT 3: 1371587-1377005 bp Neighborhood of RT #1 [585459, 588967] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1028101, 1033732] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1371587, 1377007] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Feature: gene Location: 585459-586190 bp Feature: domain Description: Laminin_G_3 Location: 585780-586134 bp Feature: domain Description: Laminin_G_3 Location: 585780-5861 34 bp Feature: gene Location: 586187-586396 bp Feature: gene Location: 586846-588333 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 587251-587941 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 587251 -587941 bp Feature: gene Location: 588411-588650 bp Feature: gene Location: 588650-588967 bp Feature: domain Description: PRK10276 Location: 588656-588770 bp Feature: domain Description: PRK1 0276 Location: 588656-588770 bp Feature: domain Description: PRK10276 Location: 588797-588866 bp Feature: domain Description: PRK1 0276 Location: 588797-588866 bp Feature: gene Location: 1028101-1028664 bp Feature: domain Description: YbjK Location: 1028107-1028644 bp Feature: domain Description: YbjK Location: 1 0281 07-1 028644 bp Feature: gene Location: 1028787-1029839 bp Feature: domain Description: int Location: 1028790-1029789 bp Feature: domain Description: int Location: 1 028790-1 029789 bp Feature: gene Location: 1030255-1031742 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1030660-1031350 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 030660-1 031 350 bp Feature: gene Location: 1032525-1032785 bp Feature: gene Location: 1032797-1033732 bp Feature: domain Description: Phage_CI_repr Location: 1032881-1033064 bp Feature: domain Description: Phage_CI_repr Location: 1 032881 -1 033064 bp Feature: domain Description: Phage_CI_repr Location: 1033193-1033385 bp Feature: domain Description: Phage_CI_repr Location: 1 0331 93-1 033385 bp Feature: domain Description: Phage_CI_C Location: 1033412-1033706 bp Feature: domain Description: Phage_CI_C Location: 1 03341 2-1 033706 bp Feature: gene Location: 1371587-1372726 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1371770-1372670 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 371 770-1 372670 bp Feature: gene Location: 1372897-1373139 bp Feature: domain Description: DinI Location: 1372948-1373128 bp Feature: domain Description: DinI Location: 1 372948-1 3731 28 bp Feature: gene Location: 1373754-1375241 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1374159-1374849 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 3741 59-1 374849 bp Feature: gene Location: 1375320-1375739 bp Feature: domain Description: PRK10276 Location: 1375323-1375734 bp Feature: domain Description: PRK1 0276 Location: 1 375323-1 375734 bp Feature: gene Location: 1375742-1377007 bp Feature: domain Description: umuC Location: 1375745-1377005 bp Feature: domain Description: umuC Location: 1 375745-1 377005 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)

Seq: KQ236890.1 Klebsiella pneumoniae strain CHS130 genomic scaffold aetyA-supercont1.4, whole genome shotgun sequence (160088 bp)
Overview 1 RT 1: 105292-110286 bp Neighborhood of RT #1 [105292, 110288] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 105292-106563 bp Feature: domain Description: umuC Location: 105295-106558 bp Feature: domain Description: umuC Location: 1052 95-106558 bp Feature: gene Location: 106563-106988 bp Feature: domain Description: PRK10276 Location: 106566-106974 bp Feature: domain Description: PRK102 76 Location: 106566-106974 bp Feature: gene Location: 107391-108878 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 107796-108486 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 107796-108486 bp Feature: gene Location: 109112-109342 bp Feature: gene Location: 109863-110288 bp Feature: domain Description: Antirestrict Location: 109998-110286 bp Feature: domain Description: Antirestrict Location: 109998-1102 86 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: KQ236889.1 Klebsiella pneumoniae strain CHS130 genomic scaffold aetyA-supercont1.3, whole genome shotgun sequence (498771 bp)
Overview 1 RT 1: 12023-17352 bp Neighborhood of RT #1 [12023, 17354] PinE RVT-GII PRK10276 umuC Feature: gene Location: 12023-12191 bp Feature: gene Location: 12257-12706 bp Feature: domain Description: PinE Location: 12266-12698 bp Feature: domain Description: PinE Location: 12266-12698 bp Feature: gene Location: 14101-15588 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14506-15196 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14506-15196 bp Feature: gene Location: 15581-16087 bp Feature: domain Description: PRK10276 Location: 15671-16082 bp Feature: domain Description: PRK10276 Location: 15671-16082 bp Feature: gene Location: 16089-17354 bp Feature: domain Description: umuC Location: 16092-17352 bp Feature: domain Description: umuC Location: 16092-173 52 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: KQ236887.1 Klebsiella pneumoniae strain CHS130 genomic scaffold aetyA-supercont1.1, whole genome shotgun sequence (3531784 bp)
Overview 1 RT 1: 886592-893075 bp Neighborhood of RT #1 [886592, 893077] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 886592-887650 bp Feature: domain Description: YccC Location: 886598-887636 bp Feature: domain Description: YccC Location: 886598-887636 bp Feature: gene Location: 887749-888222 bp Feature: domain Description: PRK10016 Location: 887752-888211 bp Feature: domain Description: PRK10016 Location: 887752-888211 bp Feature: gene Location: 888304-889791 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 888709-889399 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 888709-889399 bp Feature: gene Location: 890309-891472 bp Feature: domain Description: dacD Location: 890312-891467 bp Feature: domain Description: dacD Location: 890312-8914 67 bp Feature: gene Location: 891653-893077 bp Feature: domain Description: SbcB Location: 891659-893075 bp Feature: domain Description: SbcB Location: 891659-893075 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)