myRT

myRT report for GCA_001185945.1_Kleb_pneu_CHS124_V1

Download annotations/find similar RTs

Seq: KQ236897.1 Klebsiella pneumoniae strain CHS124 genomic scaffold aetyn-supercont1.1, whole genome shotgun sequence (3486571 bp)
Overview 1 RT 1: 976135-981740 bp 2 RT 2: 1320379-1325797 bp 3 RT 3: 1508677-1513996 bp 4 RT 4: 2932017-2938500 bp Neighborhood of RT #1 [976135, 981766] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #2 [1320379, 1325799] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #3 [1508677, 1513998] PinE RVT-GII PRK10276 umuC Neighborhood of RT #4 [2932017, 2938502] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 976135-976698 bp Feature: domain Description: YbjK Location: 976141-976678 bp Feature: domain Description: YbjK Location: 9761 41 -976678 bp Feature: gene Location: 976821-977873 bp Feature: domain Description: int Location: 976824-977823 bp Feature: domain Description: int Location: 976824-977823 bp Feature: gene Location: 978289-979776 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 978694-979384 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 978694-979384 bp Feature: gene Location: 979875-980819 bp Feature: gene Location: 980831-981766 bp Feature: domain Description: Phage_CI_repr Location: 980915-981098 bp Feature: domain Description: Phage_CI_repr Location: 98091 5-981 098 bp Feature: domain Description: Phage_CI_repr Location: 981227-981419 bp Feature: domain Description: Phage_CI_repr Location: 981 227-981 41 9 bp Feature: domain Description: Phage_CI_C Location: 981446-981740 bp Feature: domain Description: Phage_CI_C Location: 981 446-981 740 bp Feature: gene Location: 1320379-1321518 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1320562-1321462 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 320562-1 321 462 bp Feature: gene Location: 1321689-1321931 bp Feature: domain Description: DinI Location: 1321740-1321920 bp Feature: domain Description: DinI Location: 1 321 740-1 321 920 bp Feature: gene Location: 1322546-1324033 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1322951-1323641 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 322951 -1 323641 bp Feature: gene Location: 1324112-1324531 bp Feature: domain Description: PRK10276 Location: 1324115-1324526 bp Feature: domain Description: PRK1 0276 Location: 1 3241 1 5-1 324526 bp Feature: gene Location: 1324534-1325799 bp Feature: domain Description: umuC Location: 1324537-1325797 bp Feature: domain Description: umuC Location: 1 324537-1 325797 bp Feature: gene Location: 1508677-1508835 bp Feature: gene Location: 1508901-1509350 bp Feature: domain Description: PinE Location: 1508910-1509342 bp Feature: domain Description: PinE Location: 1 50891 0-1 509342 bp Feature: gene Location: 1510745-1512232 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1511150-1511840 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 51 1 1 50-1 51 1 840 bp Feature: gene Location: 1512225-1512731 bp Feature: domain Description: PRK10276 Location: 1512315-1512726 bp Feature: domain Description: PRK1 0276 Location: 1 51 231 5-1 51 2726 bp Feature: gene Location: 1512733-1513998 bp Feature: domain Description: umuC Location: 1512736-1513996 bp Feature: domain Description: umuC Location: 1 51 2736-1 51 3996 bp Feature: gene Location: 2932017-2933075 bp Feature: domain Description: YccC Location: 2932023-2933061 bp Feature: domain Description: YccC Location: 2932023-2933061 bp Feature: gene Location: 2933174-2933647 bp Feature: domain Description: PRK10016 Location: 2933177-2933636 bp Feature: domain Description: PRK1 001 6 Location: 29331 77-2933636 bp Feature: gene Location: 2933729-2935216 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2934134-2934824 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29341 34-2934824 bp Feature: gene Location: 2935734-2936897 bp Feature: domain Description: dacD Location: 2935737-2936892 bp Feature: domain Description: dacD Location: 2935737-2936892 bp Feature: gene Location: 2937078-2938502 bp Feature: domain Description: SbcB Location: 2937084-2938500 bp Feature: domain Description: SbcB Location: 2937084-2938500 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YbjK (COG3226), int (PHA02601), RVT-GII, Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), PinE (COG1961)
YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)

Seq: KQ236899.1 Klebsiella pneumoniae strain CHS124 genomic scaffold aetyn-supercont1.3, whole genome shotgun sequence (175079 bp)
Overview 1 RT 1: 117367-122361 bp Neighborhood of RT #1 [117367, 122363] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 117367-118638 bp Feature: domain Description: umuC Location: 117370-118633 bp Feature: domain Description: umuC Location: 117370-118633 bp Feature: gene Location: 118638-119063 bp Feature: domain Description: PRK10276 Location: 118641-119049 bp Feature: domain Description: PRK102 76 Location: 118641-119049 bp Feature: gene Location: 119466-120953 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 119871-120561 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 119871-12 0561 bp Feature: gene Location: 121187-121417 bp Feature: gene Location: 121938-122363 bp Feature: domain Description: Antirestrict Location: 122073-122361 bp Feature: domain Description: Antirestrict Location: 12 2 073-12 2 361 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)