myRT

myRT report for GCA_001185955.1_Kleb_pneu_CHS120_V1

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Seq: KQ236903.1 Klebsiella pneumoniae strain CHS120 genomic scaffold aetAx-supercont1.1, whole genome shotgun sequence (2800670 bp)
Overview 1 RT 1: 886122-892605 bp Neighborhood of RT #1 [886122, 892607] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 886122-887180 bp Feature: domain Description: YccC Location: 886128-887166 bp Feature: domain Description: YccC Location: 8861 28-8871 66 bp Feature: gene Location: 887279-887752 bp Feature: domain Description: PRK10016 Location: 887282-887741 bp Feature: domain Description: PRK1 001 6 Location: 887282-887741 bp Feature: gene Location: 887834-889321 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 888239-888929 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 888239-888929 bp Feature: gene Location: 889839-891002 bp Feature: domain Description: dacD Location: 889842-890997 bp Feature: domain Description: dacD Location: 889842-890997 bp Feature: gene Location: 891183-892607 bp Feature: domain Description: SbcB Location: 891189-892605 bp Feature: domain Description: SbcB Location: 891 1 89-892605 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)

Seq: KQ236904.1 Klebsiella pneumoniae strain CHS120 genomic scaffold aetAx-supercont1.2, whole genome shotgun sequence (2030521 bp)
Overview 1 RT 1: 583231-586638 bp 2 RT 2: 1026044-1031649 bp 3 RT 3: 1369621-1375039 bp 4 RT 4: 1547237-1553102 bp Neighborhood of RT #1 [583231, 586739] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1026044, 1031675] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1369621, 1375041] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1547237, 1553104] Rve PinE RVT-GII PRK10276 umuC Feature: gene Location: 583231-583962 bp Feature: domain Description: Laminin_G_3 Location: 583552-583906 bp Feature: domain Description: Laminin_G_3 Location: 583552 -583906 bp Feature: gene Location: 583959-584168 bp Feature: gene Location: 584618-586105 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 585023-585713 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58502 3-585713 bp Feature: gene Location: 586183-586422 bp Feature: gene Location: 586422-586739 bp Feature: domain Description: PRK10276 Location: 586428-586542 bp Feature: domain Description: PRK102 76 Location: 58642 8-586542 bp Feature: domain Description: PRK10276 Location: 586569-586638 bp Feature: domain Description: PRK102 76 Location: 586569-586638 bp Feature: gene Location: 1026044-1026607 bp Feature: domain Description: YbjK Location: 1026050-1026587 bp Feature: domain Description: YbjK Location: 102 6050-102 6587 bp Feature: gene Location: 1026730-1027782 bp Feature: domain Description: int Location: 1026733-1027732 bp Feature: domain Description: int Location: 102 6733-102 7732 bp Feature: gene Location: 1028198-1029685 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1028603-1029293 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102 8603-102 92 93 bp Feature: gene Location: 1029784-1030728 bp Feature: gene Location: 1030740-1031675 bp Feature: domain Description: Phage_CI_repr Location: 1030824-1031007 bp Feature: domain Description: Phage_CI_repr Location: 103082 4-1031007 bp Feature: domain Description: Phage_CI_repr Location: 1031136-1031328 bp Feature: domain Description: Phage_CI_repr Location: 1031136-103132 8 bp Feature: domain Description: Phage_CI_C Location: 1031355-1031649 bp Feature: domain Description: Phage_CI_C Location: 1031355-1031649 bp Feature: gene Location: 1369621-1370760 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1369804-1370704 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1369804-1370704 bp Feature: gene Location: 1370931-1371173 bp Feature: domain Description: DinI Location: 1370982-1371162 bp Feature: domain Description: DinI Location: 1370982 -1371162 bp Feature: gene Location: 1371788-1373275 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1372193-1372883 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1372 193-1372 883 bp Feature: gene Location: 1373354-1373773 bp Feature: domain Description: PRK10276 Location: 1373357-1373768 bp Feature: domain Description: PRK102 76 Location: 1373357-1373768 bp Feature: gene Location: 1373776-1375041 bp Feature: domain Description: umuC Location: 1373779-1375039 bp Feature: domain Description: umuC Location: 1373779-1375039 bp Feature: gene Location: 1547237-1547941 bp Feature: domain Description: Rve Location: 1547240-1547885 bp Feature: domain Description: Rve Location: 15472 40-1547885 bp Feature: gene Location: 1548007-1548456 bp Feature: domain Description: PinE Location: 1548016-1548448 bp Feature: domain Description: PinE Location: 1548016-1548448 bp Feature: gene Location: 1549851-1551338 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1550256-1550946 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15502 56-1550946 bp Feature: gene Location: 1551331-1551837 bp Feature: domain Description: PRK10276 Location: 1551421-1551832 bp Feature: domain Description: PRK102 76 Location: 155142 1-1551832 bp Feature: gene Location: 1551839-1553104 bp Feature: domain Description: umuC Location: 1551842-1553102 bp Feature: domain Description: umuC Location: 1551842 -1553102 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
Rve (COG3316), PinE (COG1961)

Seq: KQ236908.1 Klebsiella pneumoniae strain CHS120 genomic scaffold aetAx-supercont1.6, whole genome shotgun sequence (112478 bp)
Overview 1 RT 1: 69427-74780 bp Neighborhood of RT #1 [69427, 74917] umuC PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 69427-70698 bp Feature: domain Description: umuC Location: 69430-70690 bp Feature: domain Description: umuC Location: 6943 0-70690 bp Feature: gene Location: 70698-71129 bp Feature: domain Description: PRK10276 Location: 70749-71112 bp Feature: domain Description: PRK10276 Location: 70749-71112 bp Feature: gene Location: 71212-72699 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71617-72307 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71617-723 07 bp Feature: gene Location: 73272-74243 bp Feature: domain Description: StbA Location: 73275-74220 bp Feature: domain Description: StbA Location: 73 275-74220 bp Feature: gene Location: 74246-74917 bp Feature: domain Description: Plasmid_stab_B Location: 74261-74468 bp Feature: domain Description: Plasmid_stab_B Location: 74261-74468 bp Feature: domain Description: Plasmid_stab_B Location: 74573-74780 bp Feature: domain Description: Plasmid_stab_B Location: 74573 -74780 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)

Seq: KQ236906.1 Klebsiella pneumoniae strain CHS120 genomic scaffold aetAx-supercont1.4, whole genome shotgun sequence (162696 bp)
Overview 1 RT 1: 82452-87446 bp Neighborhood of RT #1 [82452, 87448] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 82452-83723 bp Feature: domain Description: umuC Location: 82455-83718 bp Feature: domain Description: umuC Location: 824 55-83718 bp Feature: gene Location: 83723-84148 bp Feature: domain Description: PRK10276 Location: 83726-84134 bp Feature: domain Description: PRK10276 Location: 83726-84 134 bp Feature: gene Location: 84551-86038 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 84956-85646 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 84 956-8564 6 bp Feature: gene Location: 86272-86502 bp Feature: gene Location: 87023-87448 bp Feature: domain Description: Antirestrict Location: 87158-87446 bp Feature: domain Description: Antirestrict Location: 87158-874 4 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)