myRT

myRT report for GCA_001185985.1_Kleb_pneu_CHS119_V1

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Seq: KQ236916.1 Klebsiella pneumoniae strain CHS119 genomic scaffold aetzA-supercont1.3, whole genome shotgun sequence (140567 bp)
Overview 1 RT 1: 83041-88035 bp Neighborhood of RT #1 [83041, 88037] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 83041-84312 bp Feature: domain Description: umuC Location: 83044-84307 bp Feature: domain Description: umuC Location: 83044-84307 bp Feature: gene Location: 84312-84737 bp Feature: domain Description: PRK10276 Location: 84315-84723 bp Feature: domain Description: PRK1 0276 Location: 8431 5-84723 bp Feature: gene Location: 85140-86627 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85545-86235 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85545-86235 bp Feature: gene Location: 86861-87091 bp Feature: gene Location: 87612-88037 bp Feature: domain Description: Antirestrict Location: 87747-88035 bp Feature: domain Description: Antirestrict Location: 87747-88035 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: KQ236914.1 Klebsiella pneumoniae strain CHS119 genomic scaffold aetzA-supercont1.1, whole genome shotgun sequence (3423285 bp)
Overview 1 RT 1: 894865-901348 bp Neighborhood of RT #1 [894865, 901350] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 894865-895923 bp Feature: domain Description: YccC Location: 894871-895909 bp Feature: domain Description: YccC Location: 894871-895909 bp Feature: gene Location: 896022-896495 bp Feature: domain Description: PRK10016 Location: 896025-896484 bp Feature: domain Description: PRK10016 Location: 89602 5-896484 bp Feature: gene Location: 896577-898064 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 896982-897672 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 896982 -897672 bp Feature: gene Location: 898582-899745 bp Feature: domain Description: dacD Location: 898585-899740 bp Feature: domain Description: dacD Location: 898585-899740 bp Feature: gene Location: 899926-901350 bp Feature: domain Description: SbcB Location: 899932-901348 bp Feature: domain Description: SbcB Location: 899932 -901348 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)

Seq: KQ236915.1 Klebsiella pneumoniae strain CHS119 genomic scaffold aetzA-supercont1.2, whole genome shotgun sequence (2037813 bp)
Overview 1 RT 1: 586162-589569 bp 2 RT 2: 1028804-1034409 bp 3 RT 3: 1372119-1377537 bp 4 RT 4: 1557437-1562722 bp Neighborhood of RT #1 [586162, 589670] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1028804, 1034435] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1372119, 1377539] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1557437, 1562724] PinE RVT-GII PRK10276 umuC Feature: gene Location: 586162-586893 bp Feature: domain Description: Laminin_G_3 Location: 586483-586837 bp Feature: domain Description: Laminin_G_3 Location: 586483 -58683 7 bp Feature: gene Location: 586890-587099 bp Feature: gene Location: 587549-589036 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 587954-588644 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 587954-588644 bp Feature: gene Location: 589114-589353 bp Feature: gene Location: 589353-589670 bp Feature: domain Description: PRK10276 Location: 589359-589473 bp Feature: domain Description: PRK10276 Location: 5893 59-589473 bp Feature: domain Description: PRK10276 Location: 589500-589569 bp Feature: domain Description: PRK10276 Location: 589500-589569 bp Feature: gene Location: 1028804-1029367 bp Feature: domain Description: YbjK Location: 1028810-1029347 bp Feature: domain Description: YbjK Location: 1028810-10293 47 bp Feature: gene Location: 1029490-1030542 bp Feature: domain Description: int Location: 1029493-1030492 bp Feature: domain Description: int Location: 1029493 -103 0492 bp Feature: gene Location: 1030958-1032445 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1031363-1032053 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 103 13 63 -103 2053 bp Feature: gene Location: 1032544-1033488 bp Feature: gene Location: 1033500-1034435 bp Feature: domain Description: Phage_CI_repr Location: 1033584-1033767 bp Feature: domain Description: Phage_CI_repr Location: 103 3 584-103 3 767 bp Feature: domain Description: Phage_CI_repr Location: 1033896-1034088 bp Feature: domain Description: Phage_CI_repr Location: 103 3 896-103 4088 bp Feature: domain Description: Phage_CI_C Location: 1034115-1034409 bp Feature: domain Description: Phage_CI_C Location: 103 4115-103 4409 bp Feature: gene Location: 1372119-1373258 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1372302-1373202 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 13 723 02-13 73 202 bp Feature: gene Location: 1373429-1373671 bp Feature: domain Description: DinI Location: 1373480-1373660 bp Feature: domain Description: DinI Location: 13 73 480-13 73 660 bp Feature: gene Location: 1374286-1375773 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1374691-1375381 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 74691-13 753 81 bp Feature: gene Location: 1375852-1376271 bp Feature: domain Description: PRK10276 Location: 1375855-1376266 bp Feature: domain Description: PRK10276 Location: 13 75855-13 76266 bp Feature: gene Location: 1376274-1377539 bp Feature: domain Description: umuC Location: 1376277-1377537 bp Feature: domain Description: umuC Location: 13 76277-13 7753 7 bp Feature: gene Location: 1557437-1557561 bp Feature: gene Location: 1557627-1558076 bp Feature: domain Description: PinE Location: 1557636-1558068 bp Feature: domain Description: PinE Location: 155763 6-1558068 bp Feature: gene Location: 1559471-1560958 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1559876-1560566 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1559876-1560566 bp Feature: gene Location: 1560951-1561457 bp Feature: domain Description: PRK10276 Location: 1561041-1561452 bp Feature: domain Description: PRK10276 Location: 1561041-1561452 bp Feature: gene Location: 1561459-1562724 bp Feature: domain Description: umuC Location: 1561462-1562722 bp Feature: domain Description: umuC Location: 1561462-1562722 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
PinE (COG1961)