myRT

myRT report for GCA_001186005.1_Kleb_pneu_CHS108_V1

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Seq: KQ236923.1 Klebsiella pneumoniae strain CHS108 genomic scaffold aetAG-supercont1.2, whole genome shotgun sequence (1863384 bp)
Overview 1 RT 1: 583284-586691 bp 2 RT 2: 1025815-1031420 bp 3 RT 3: 1369736-1375154 bp 4 RT 4: 1553846-1559292 bp Neighborhood of RT #1 [583284, 586792] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1025815, 1031446] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1369736, 1375156] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1553846, 1559294] PinE RVT-GII PRK10276 umuC Feature: gene Location: 583284-584015 bp Feature: domain Description: Laminin_G_3 Location: 583605-583959 bp Feature: domain Description: Laminin_G_3 Location: 583605-583959 bp Feature: gene Location: 584012-584221 bp Feature: gene Location: 584671-586158 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 585076-585766 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 585076-585766 bp Feature: gene Location: 586236-586475 bp Feature: gene Location: 586475-586792 bp Feature: domain Description: PRK10276 Location: 586481-586595 bp Feature: domain Description: PRK1 0276 Location: 586481 -586595 bp Feature: domain Description: PRK10276 Location: 586622-586691 bp Feature: domain Description: PRK1 0276 Location: 586622-586691 bp Feature: gene Location: 1025815-1026378 bp Feature: domain Description: YbjK Location: 1025821-1026358 bp Feature: domain Description: YbjK Location: 1 025821 -1 026358 bp Feature: gene Location: 1026501-1027553 bp Feature: domain Description: int Location: 1026504-1027503 bp Feature: domain Description: int Location: 1 026504-1 027503 bp Feature: gene Location: 1027969-1029456 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1028374-1029064 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 028374-1 029064 bp Feature: gene Location: 1029555-1030499 bp Feature: gene Location: 1030511-1031446 bp Feature: domain Description: Phage_CI_repr Location: 1030595-1030778 bp Feature: domain Description: Phage_CI_repr Location: 1 030595-1 030778 bp Feature: domain Description: Phage_CI_repr Location: 1030907-1031099 bp Feature: domain Description: Phage_CI_repr Location: 1 030907-1 031 099 bp Feature: domain Description: Phage_CI_C Location: 1031126-1031420 bp Feature: domain Description: Phage_CI_C Location: 1 031 1 26-1 031 420 bp Feature: gene Location: 1369736-1370875 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1369919-1370819 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 36991 9-1 37081 9 bp Feature: gene Location: 1371046-1371288 bp Feature: domain Description: DinI Location: 1371097-1371277 bp Feature: domain Description: DinI Location: 1 371 097-1 371 277 bp Feature: gene Location: 1371903-1373390 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1372308-1372998 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 372308-1 372998 bp Feature: gene Location: 1373469-1373888 bp Feature: domain Description: PRK10276 Location: 1373472-1373883 bp Feature: domain Description: PRK1 0276 Location: 1 373472-1 373883 bp Feature: gene Location: 1373891-1375156 bp Feature: domain Description: umuC Location: 1373894-1375154 bp Feature: domain Description: umuC Location: 1 373894-1 3751 54 bp Feature: gene Location: 1553846-1554131 bp Feature: gene Location: 1554197-1554646 bp Feature: domain Description: PinE Location: 1554206-1554638 bp Feature: domain Description: PinE Location: 1 554206-1 554638 bp Feature: gene Location: 1556041-1557528 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1556446-1557136 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 556446-1 5571 36 bp Feature: gene Location: 1557521-1558027 bp Feature: domain Description: PRK10276 Location: 1557611-1558022 bp Feature: domain Description: PRK1 0276 Location: 1 55761 1 -1 558022 bp Feature: gene Location: 1558029-1559294 bp Feature: domain Description: umuC Location: 1558032-1559292 bp Feature: domain Description: umuC Location: 1 558032-1 559292 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
PinE (COG1961)

Seq: KQ236922.1 Klebsiella pneumoniae strain CHS108 genomic scaffold aetAG-supercont1.1, whole genome shotgun sequence (3707525 bp)
Overview 1 RT 1: 1056848-1063331 bp Neighborhood of RT #1 [1056848, 1063333] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 1056848-1057906 bp Feature: domain Description: YccC Location: 1056854-1057892 bp Feature: domain Description: YccC Location: 1056854-1057892 bp Feature: gene Location: 1058005-1058478 bp Feature: domain Description: PRK10016 Location: 1058008-1058467 bp Feature: domain Description: PRK10016 Location: 1058008-1058467 bp Feature: gene Location: 1058560-1060047 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1058965-1059655 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1058965-1059655 bp Feature: gene Location: 1060565-1061728 bp Feature: domain Description: dacD Location: 1060568-1061723 bp Feature: domain Description: dacD Location: 1060568-106172 3 bp Feature: gene Location: 1061909-1063333 bp Feature: domain Description: SbcB Location: 1061915-1063331 bp Feature: domain Description: SbcB Location: 1061915-1063331 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)

Seq: KQ236924.1 Klebsiella pneumoniae strain CHS108 genomic scaffold aetAG-supercont1.3, whole genome shotgun sequence (177600 bp)
Overview 1 RT 1: 120016-125010 bp Neighborhood of RT #1 [120016, 125012] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 120016-121287 bp Feature: domain Description: umuC Location: 120019-121282 bp Feature: domain Description: umuC Location: 120019-121282 bp Feature: gene Location: 121287-121712 bp Feature: domain Description: PRK10276 Location: 121290-121698 bp Feature: domain Description: PRK10276 Location: 121290-121698 bp Feature: gene Location: 122115-123602 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 122520-123210 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 122520-123 210 bp Feature: gene Location: 123836-124066 bp Feature: gene Location: 124587-125012 bp Feature: domain Description: Antirestrict Location: 124722-125010 bp Feature: domain Description: Antirestrict Location: 124722-125010 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)