myRT

myRT report for GCA_001186035.1_Kleb_pneu_CHS87_V1

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Seq: KQ236936.1 Klebsiella pneumoniae strain CHS87 genomic scaffold aetAq-supercont1.1, whole genome shotgun sequence (3231507 bp)
Overview 1 RT 1: 331452-334859 bp 2 RT 2: 774092-779697 bp 3 RT 3: 1117197-1122615 bp 4 RT 4: 1300724-1306589 bp 5 RT 5: 2675490-2681973 bp Neighborhood of RT #1 [331452, 334960] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [774092, 779723] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1117197, 1122617] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1300724, 1306591] Rve PinE RVT-GII PRK10276 umuC Neighborhood of RT #5 [2675490, 2681975] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 331452-332183 bp Feature: domain Description: Laminin_G_3 Location: 331773-332127 bp Feature: domain Description: Laminin_G_3 Location: 331 773-3321 27 bp Feature: gene Location: 332180-332389 bp Feature: gene Location: 332839-334326 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 333244-333934 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 333244-333934 bp Feature: gene Location: 334404-334643 bp Feature: gene Location: 334643-334960 bp Feature: domain Description: PRK10276 Location: 334649-334763 bp Feature: domain Description: PRK1 0276 Location: 334649-334763 bp Feature: domain Description: PRK10276 Location: 334790-334859 bp Feature: domain Description: PRK1 0276 Location: 334790-334859 bp Feature: gene Location: 774092-774655 bp Feature: domain Description: YbjK Location: 774098-774635 bp Feature: domain Description: YbjK Location: 774098-774635 bp Feature: gene Location: 774778-775830 bp Feature: domain Description: int Location: 774781-775780 bp Feature: domain Description: int Location: 774781 -775780 bp Feature: gene Location: 776246-777733 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 776651-777341 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 776651 -777341 bp Feature: gene Location: 777832-778776 bp Feature: gene Location: 778788-779723 bp Feature: domain Description: Phage_CI_repr Location: 778872-779055 bp Feature: domain Description: Phage_CI_repr Location: 778872-779055 bp Feature: domain Description: Phage_CI_repr Location: 779184-779376 bp Feature: domain Description: Phage_CI_repr Location: 7791 84-779376 bp Feature: domain Description: Phage_CI_C Location: 779403-779697 bp Feature: domain Description: Phage_CI_C Location: 779403-779697 bp Feature: gene Location: 1117197-1118336 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1117380-1118280 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 1 1 7380-1 1 1 8280 bp Feature: gene Location: 1118507-1118749 bp Feature: domain Description: DinI Location: 1118558-1118738 bp Feature: domain Description: DinI Location: 1 1 1 8558-1 1 1 8738 bp Feature: gene Location: 1119364-1120851 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1119769-1120459 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 1 9769-1 1 20459 bp Feature: gene Location: 1120930-1121349 bp Feature: domain Description: PRK10276 Location: 1120933-1121344 bp Feature: domain Description: PRK1 0276 Location: 1 1 20933-1 1 21 344 bp Feature: gene Location: 1121352-1122617 bp Feature: domain Description: umuC Location: 1121355-1122615 bp Feature: domain Description: umuC Location: 1 1 21 355-1 1 2261 5 bp Feature: gene Location: 1300724-1301428 bp Feature: domain Description: Rve Location: 1300727-1301372 bp Feature: domain Description: Rve Location: 1 300727-1 301 372 bp Feature: gene Location: 1301494-1301943 bp Feature: domain Description: PinE Location: 1301503-1301935 bp Feature: domain Description: PinE Location: 1 301 503-1 301 935 bp Feature: gene Location: 1303338-1304825 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1303743-1304433 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 303743-1 304433 bp Feature: gene Location: 1304818-1305324 bp Feature: domain Description: PRK10276 Location: 1304908-1305319 bp Feature: domain Description: PRK1 0276 Location: 1 304908-1 30531 9 bp Feature: gene Location: 1305326-1306591 bp Feature: domain Description: umuC Location: 1305329-1306589 bp Feature: domain Description: umuC Location: 1 305329-1 306589 bp Feature: gene Location: 2675490-2676548 bp Feature: domain Description: YccC Location: 2675496-2676534 bp Feature: domain Description: YccC Location: 2675496-2676534 bp Feature: gene Location: 2676647-2677120 bp Feature: domain Description: PRK10016 Location: 2676650-2677109 bp Feature: domain Description: PRK1 001 6 Location: 2676650-26771 09 bp Feature: gene Location: 2677202-2678689 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2677607-2678297 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2677607-2678297 bp Feature: gene Location: 2679207-2680370 bp Feature: domain Description: dacD Location: 2679210-2680365 bp Feature: domain Description: dacD Location: 267921 0-2680365 bp Feature: gene Location: 2680551-2681975 bp Feature: domain Description: SbcB Location: 2680557-2681973 bp Feature: domain Description: SbcB Location: 2680557-2681 973 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
Rve (COG3316), PinE (COG1961), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)

Seq: KQ236941.1 Klebsiella pneumoniae strain CHS87 genomic scaffold aetAq-supercont1.6, whole genome shotgun sequence (245434 bp)
Overview 1 RT 1: 54047-59529 bp 2 RT 2: 170772-175766 bp Neighborhood of RT #1 [54047, 59537] Plasmid_stab_B Plasmid_stab_B StbA RVT-GII PRK10276 umuC Neighborhood of RT #2 [170772, 175768] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 54047-54718 bp Feature: domain Description: Plasmid_stab_B Location: 54062-54269 bp Feature: domain Description: Plasmid_stab_B Location: 54062 -542 69 bp Feature: domain Description: Plasmid_stab_B Location: 54374-54581 bp Feature: domain Description: Plasmid_stab_B Location: 54374-54581 bp Feature: gene Location: 54721-55692 bp Feature: domain Description: StbA Location: 54724-55669 bp Feature: domain Description: StbA Location: 5472 4-55669 bp Feature: gene Location: 56265-57752 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56670-57360 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56670-57360 bp Feature: gene Location: 57835-58266 bp Feature: domain Description: PRK10276 Location: 57886-58249 bp Feature: domain Description: PRK102 76 Location: 57886-582 49 bp Feature: gene Location: 58266-59537 bp Feature: domain Description: umuC Location: 58269-59529 bp Feature: domain Description: umuC Location: 582 69-5952 9 bp Feature: gene Location: 170772-172043 bp Feature: domain Description: umuC Location: 170775-172038 bp Feature: domain Description: umuC Location: 170775-172 038 bp Feature: gene Location: 172043-172468 bp Feature: domain Description: PRK10276 Location: 172046-172454 bp Feature: domain Description: PRK102 76 Location: 172 046-172 454 bp Feature: gene Location: 172871-174358 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 173276-173966 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1732 76-173966 bp Feature: gene Location: 174592-174822 bp Feature: gene Location: 175343-175768 bp Feature: domain Description: Antirestrict Location: 175478-175766 bp Feature: domain Description: Antirestrict Location: 175478-175766 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Plasmid_stab_B (pfam10784), StbA (pfam06406), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), Antirestrict (pfam03230)